ggKbase home page

rifcsplowo2_01_scaffold_95547

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_95547_1
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

152..754
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036745B5
DNA polymerase beta domain-containing protein region Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsplowo2_01_scaffold_95547_2
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

741..1100
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037D880D
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
HEPN domain-containing protein
rifcsplowo2_01_scaffold_95547_3
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

1310..1573
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NEF6_DESAR
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
hypothetical protein
rifcsplowo2_01_scaffold_95547_4

Not on your lists

1570..2592
DNA (1023bp) protein (341aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.4 1.2.4.1)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.4); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] id=5241313 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000313|EMBL:AJF60304.1}; EC=1.2.4.1 {ECO:0000313|EMBL:AJF60304.1};; EC=1.2.4.4 {ECO:0000313|EMBL:AJF60304.1};; TaxID=1579370 species="Archaea.;"
rifcsplowo2_01_scaffold_95547_5
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

2589..2999
DNA (411bp) protein (137aa)
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] id=7202451 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RIFOXYC12_FULL_TA06_54_24_curated
rifcsplowo2_01_scaffold_95547_6
unknown

Not on your lists

2984..3340
DNA (357bp) protein (119aa)

This feature has no annotations

rifcsplowo2_01_scaffold_95547_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3340..4311
DNA (972bp) protein (324aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit {ECO:0000313|EMBL:KCZ70909.1}; EC=1.2.4.1 {ECO:0000313|EMBL:KCZ70909.1};; TaxID=1392998 species="Archaea; Euryarchae
pyruvate dehydrogenase E1 component subunit beta (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5S918_9BACT
rifcsplowo2_01_scaffold_95547_8
R_PER_46_8, Bacteria

Not on your lists

4312..4698
DNA (387bp) protein (129aa)
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=RIFCSPHIGHO2_01_FULL_PER_46_8_curated
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] id=24413757 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
pyruvate dehydrogenase E2 component dihydrolipoamide acetyltransferase (EC:2.3.1.12)
rifcsplowo2_01_scaffold_95547_9
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

4688..5500
DNA (813bp) protein (271aa)
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] id=5048732 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12)
rifcsplowo2_01_scaffold_95547_10
Leptotrichia sp. oral taxon 879, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

5536..6174
DNA (639bp) protein (213aa)
thiamine pyrophosphokinase n=1 Tax=Leptotrichia shahii RepID=UPI00036E4A5C
thiamine pyrophosphokinase
Thiamine diphosphokinase {ECO:0000313|EMBL:ERK51874.1}; TaxID=1227268 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 879 str. F
rifcsplowo2_01_scaffold_95547_11
unknown

Not on your lists

6168..6929
DNA (762bp) protein (254aa)

This feature has no annotations

rifcsplowo2_01_scaffold_95547_12
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6932..7186)
DNA (255bp) protein (85aa)
fer4; ferredoxin IV Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
Ferredoxin id=4385764 bin=GWA2_OP3_53_43 species=Chlamydophila caviae genus=Chlamydophila taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
fdxC; ferredoxin-4
rifcsplowo2_01_scaffold_95547_13
RIFOXYD1_FULL_OD1_Magasanikbacteria_40_23_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7222..7842)
DNA (621bp) protein (207aa)
thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=RIFOXYD1_FULL_OD1_Magasanikbacteria_40_23_curated
thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] id=120299 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rifcsplowo2_01_scaffold_95547_14
RIFOXYC2_FULL_OD1_Yanofskybacteria_44_13_curated, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(7869..8495)
DNA (627bp) protein (209aa)
thyX; thymidylate synthase ThyX; K03465 thymidylate synthase (FAD) [EC:2.1.1.148] Tax=RIFOXYC2_FULL_OD1_Yanofskybacteria_44_13_curated
Thymidylate synthase ThyX id=1924366 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
thymidylate synthase, flavin-dependent
Displaying 14 items

View Taxonomy