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rifcsplowo2_01_scaffold_1860

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_1860_1
unknown

Not on your lists

comp(1..459)
-----------------
DNA (459bp)
protein (153aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1860_2
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(546..1034)
-----------------
DNA (489bp)
protein (163aa)
Uncharacterized protein n=2 Tax=Lysinibacillus fusiformis RepID=D7WNC4_9BACI
hypothetical protein Tax=AR13
rifcsplowo2_01_scaffold_1860_3
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(992..2344)
-----------------
DNA (1353bp)
protein (451aa)
heavy metal transporter n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B4EB21
Heavy metal transport/detoxification protein (fragment) Tax=AR13
heavy metal transport/detoxification protein
rifcsplowo2_01_scaffold_1860_4
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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comp(2331..2531)
-----------------
DNA (201bp)
protein (67aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
copper ion binding protein; K07213 copper chaperone
rifcsplowo2_01_scaffold_1860_5

Not on your lists

2614..3291
-----------------
DNA (678bp)
protein (226aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52060.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
rifcsplowo2_01_scaffold_1860_6
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

3272..3544
-----------------
DNA (273bp)
protein (91aa)
hypothetical protein Tax=AR17
Putative uncharacterized protein id=5045885 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_1860_7
unknown

Not on your lists

3550..3711
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1860_8

Not on your lists

3736..5445
-----------------
DNA (1710bp)
protein (570aa)
translation initiation factor eaif-5b; K03243 translation initiation factor 5B id=5045750 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Translation initiation factor 5B {ECO:0000313|EMBL:KHO54417.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
putative translation initiation factor IF-2
rifcsplowo2_01_scaffold_1860_9
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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5447..5824
-----------------
DNA (378bp)
protein (126aa)
30S ribosomal protein S6e n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RI14_ARCPA
30S ribosomal protein S6e
30S ribosomal protein S6e {ECO:0000256|HAMAP-Rule:MF_00512, ECO:0000256|SAAS:SAAS00018829}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus
rifcsplowo2_01_scaffold_1860_10
AR18, Woesearchaeaota, DPANN, Archaea

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comp(5814..6584)
-----------------
DNA (771bp)
protein (257aa)
cell division inhibitor; K03609 septum site-determining protein MinD id=5045746 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cell division inhibitor; K03609 septum site-determining protein MinD Tax=AR18
cell division ATPase MinD
rifcsplowo2_01_scaffold_1860_11

Not on your lists

comp(6883..7605)
-----------------
DNA (723bp)
protein (241aa)
hypothetical protein id=5045708 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54375.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
rifcsplowo2_01_scaffold_1860_12
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7606..8238)
-----------------
DNA (633bp)
protein (211aa)
peptidase m50 id=5045709 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
peptidase m50 Tax=AR18
Conserved hypothetical membrane protein, peptidase family M50
rifcsplowo2_01_scaffold_1860_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(8264..8896)
-----------------
DNA (633bp)
protein (211aa)
deoxyribonuclease V (EC:3.1.21.7); K05982 deoxyribonuclease V [EC:3.1.21.7] Tax=RBG_13_Woesearchaeota_36_6_curated
endonuclease V (EC:3.1.21.7)
Endonuclease V n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=NFI_DICTD
rifcsplowo2_01_scaffold_1860_14
Methanocaldococcus vulcanius, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(9251..10543)
-----------------
DNA (1293bp)
protein (431aa)
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.34 {ECO:0000256|RuleBase:RU361219};; TaxID=579137 sp
3-hydroxy-3-methylglutaryl-CoA reductase n=1 Tax=Methanocaldococcus villosus RepID=UPI0003675711
3-hydroxy-3-methylglutaryl-CoA reductase
rifcsplowo2_01_scaffold_1860_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

10707..11303
-----------------
DNA (597bp)
protein (199aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=CG_Woesearch_02
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] id=5045719 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Ribonuclease
rifcsplowo2_01_scaffold_1860_16

Not on your lists

11383..12108
-----------------
DNA (726bp)
protein (242aa)
hypothetical protein; K05896 segregation and condensation protein A id=5045723 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54390.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Chromosome segregation and condensation protein ScpA
rifcsplowo2_01_scaffold_1860_17
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(12095..12397)
-----------------
DNA (303bp)
protein (101aa)
nitric oxide dioxygenase (EC:1.14.12.17) id=96529 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein Tax=AR13
cupin domain-containing protein
rifcsplowo2_01_scaffold_1860_18
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(12394..12927)
-----------------
DNA (534bp)
protein (178aa)
hypothetical protein Tax=AR13
hemerythrin HHE cation binding domain protein id=96536 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
cytoplasmic protein
rifcsplowo2_01_scaffold_1860_19

Not on your lists

comp(12920..13225)
-----------------
DNA (306bp)
protein (102aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003790FC7
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:KHO50445.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
hypothetical protein
rifcsplowo2_01_scaffold_1860_20
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

13903..14526
-----------------
DNA (624bp)
protein (208aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036745B5
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_1860_21
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

14523..15047
-----------------
DNA (525bp)
protein (175aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037D880D
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsplowo2_01_scaffold_1860_22
unknown

Not on your lists

comp(15352..15828)
-----------------
DNA (477bp)
protein (159aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1860_23

Not on your lists


15900..16526
-----------------
DNA (627bp)
protein (209aa)
pre-mRNA processing ribonucleoprotein, binding domain protein; K14564 nucleolar protein 56 id=5051511 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Nucleolar protein 56 {ECO:0000313|EMBL:KHO53100.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
pre-mRNA processing ribonucleoprotein
rifcsplowo2_01_scaffold_1860_24
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

16657..17568
-----------------
DNA (912bp)
protein (304aa)
BioB-related protein Tax=RBG_13_Woesearchaeota_36_6_curated
Radical SAM domain-containing protein id=5799836 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
radical SAM protein
rifcsplowo2_01_scaffold_1860_25
unknown

Not on your lists

17626..18171
-----------------
DNA (546bp)
protein (182aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1860_26
unknown

Not on your lists

comp(18168..19151)
-----------------
DNA (984bp)
protein (328aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1860_27
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(19260..19970)
-----------------
DNA (711bp)
protein (237aa)
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RBG_13_Woesearchaeota_36_6_curated
gcd1; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] id=5241118 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_1860_28
unknown

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comp(19983..20225)
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1860_29
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

20316..22181
-----------------
DNA (1866bp)
protein (622aa)
cooSIV; carbon-monoxide dehydrogenase catalytic subunit (EC:1.2.99.2)
Carbon-monoxide dehydrogenase, catalytic subunit {ECO:0000313|EMBL:ABB15066.1}; EC=1.2.99.2 {ECO:0000313|EMBL:ABB15066.1};; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacteral
Carbon-monoxide dehydrogenase, catalytic subunit n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AE44_CARHZ
rifcsplowo2_01_scaffold_1860_30
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(22364..23263)
-----------------
DNA (900bp)
protein (300aa)
signal peptide peptidase SppA, 36K type; K04773 protease IV [EC:3.4.21.-] id=5044152 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
signal peptide peptidase SppA, 36K type; K04773 protease IV [EC:3.4.21.-] Tax=AR18
Signal peptide peptidase SppA, 36K type
Displaying items 1-30 of 56 in total

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