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rifcsplowo2_01_scaffold_5822

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_5822_1

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comp(1..411)
-----------------
DNA (411bp)
protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50719.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
Putative protease id=4328455 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
protease
rifcsplowo2_01_scaffold_5822_2
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(435..1328)
-----------------
DNA (894bp)
protein (298aa)
hypothetical protein
Putative uncharacterized protein Tax=CG_Woesearch_02
id=5103053 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_5822_3
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1375..1899)
-----------------
DNA (525bp)
protein (175aa)
tRNA-splicing endonuclease subunit alpha (EC:3.1.27.9); K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=CG_Woesearch_02
tRNA-intron endonuclease id=5800108 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA-intron endonuclease
rifcsplowo2_01_scaffold_5822_4

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1952..2842
-----------------
DNA (891bp)
protein (297aa)
rnz; ribonuclease Z Rnz (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] id=5046343 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
RNAse Z
rifcsplowo2_01_scaffold_5822_5
unknown

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comp(2832..3650)
-----------------
DNA (819bp)
protein (273aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5822_6

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3770..4483
-----------------
DNA (714bp)
protein (238aa)
Phosphatidylglycerol:prolipoprotein diacylglycerol transferase {ECO:0000313|EMBL:KHO50652.1}; EC=2.-.-.- {ECO:0000313|EMBL:KHO50652.1};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.
Prolipoprotein diacylglyceryl transferase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0P8_9BACT id=5103549 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Prolipoprotein diacylglyceryl transferase
rifcsplowo2_01_scaffold_5822_7
Metallosphaera yellowstonensis, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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4512..5717
-----------------
DNA (1206bp)
protein (402aa)
Glycosyltransferase n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C6G6_9CREN
Glycosyltransferase {ECO:0000313|EMBL:EHP69393.1}; TaxID=671065 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Metallosphaera.;" source="Metallosphaera yellowstonensis MK1
group 1 glycosyl transferase
rifcsplowo2_01_scaffold_5822_8
unknown

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comp(5698..7560)
-----------------
DNA (1863bp)
protein (621aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003740DAE
GTP pyrophosphokinase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3A9Z8_CARHZ Tax=AR20
GTP pyrophosphokinase
rifcsplowo2_01_scaffold_5822_9
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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7612..8001
-----------------
DNA (390bp)
protein (130aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=1 Tax=cyanobacterium UCYN-A RepID=D3EQM4_UCYNA id=5103424 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
glycosyl transferase family protein Tax=RBG_16_Pacearchaeota_35_8_curated
rifcsplowo2_01_scaffold_5822_10
unknown

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8414..8947
-----------------
DNA (534bp)
protein (178aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5822_11
AR15, Woesearchaeaota, DPANN, Archaea

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9251..9508
-----------------
DNA (258bp)
protein (86aa)
UBA/THIF-type NAD/FAD binding protein id=5800094 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
UBA/THIF-type NAD/FAD binding protein Tax=AR15
UBA/THiF-type NAD/FAD binding protein
rifcsplowo2_01_scaffold_5822_12
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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9486..10025
-----------------
DNA (540bp)
protein (180aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000379B0D2
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:EHK01282.1}; Flags: Fragment;; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Halorediv
molybdopterin biosynthesis protein MoeB
rifcsplowo2_01_scaffold_5822_13
unknown

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10116..10724
-----------------
DNA (609bp)
protein (203aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5822_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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10759..10950
-----------------
DNA (192bp)
protein (64aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037D6311
id=5046312 Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsplowo2_01_scaffold_5822_15

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10943..11845
-----------------
DNA (903bp)
protein (301aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28677_ARCFU id=5103886 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF63164.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_5822_16
unknown

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11882..12262
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5822_17

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12259..12735
-----------------
DNA (477bp)
protein (159aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3INE5_9PLAN id=5103885 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF63163.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_5822_18

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comp(12834..13478)
-----------------
DNA (645bp)
protein (215aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000364237D
LmbE family protein {ECO:0000313|EMBL:KHO49152.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
hypothetical protein
rifcsplowo2_01_scaffold_5822_19

Not on your lists


comp(13509..14183)
-----------------
DNA (675bp)
protein (225aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5050963 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
LSU ribosomal protein L11P
rifcsplowo2_01_scaffold_5822_20

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comp(14215..14700)
-----------------
DNA (486bp)
protein (162aa)
transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG id=5050965 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
LSU ribosomal protein L24A Rpl24A
rifcsplowo2_01_scaffold_5822_21
AR18, Woesearchaeaota, DPANN, Archaea

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comp(14740..14937)
-----------------
DNA (198bp)
protein (66aa)
Preprotein translocase subunit SecE id=5050966 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Preprotein translocase subunit SecE Tax=AR18
Preprotein translocase subunit secE
rifcsplowo2_01_scaffold_5822_22
AR18, Woesearchaeaota, DPANN, Archaea

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comp(14967..16085)
-----------------
DNA (1119bp)
protein (373aa)
cell division protein FtsZ; K03531 cell division protein FtsZ id=5050968 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=AR18
Cell division protein FtsZ
rifcsplowo2_01_scaffold_5822_23

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comp(16121..16777)
-----------------
DNA (657bp)
protein (219aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A6AAC
Marine sediment metagenome DNA, contig: S01H1_S32338 {ECO:0000313|EMBL:GAG36499.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Peptidyl-prolyl cis-trans isomerase
rifcsplowo2_01_scaffold_5822_24
unknown

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comp(16808..17449)
-----------------
DNA (642bp)
protein (214aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5822_25

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17545..17937
-----------------
DNA (393bp)
protein (131aa)
translation initiation factor eIF-5A; K03263 translation initiation factor 5A id=5050970 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Translation initiation factor 5A {ECO:0000313|EMBL:KHO53248.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Translation initiation factor 5A
rifcsplowo2_01_scaffold_5822_26
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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17947..18114
-----------------
DNA (168bp)
protein (56aa)
hypothetical protein
50S ribosomal protein L40E Tax=CG_Aenigma_01
id=5800377 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_5822_27
AR18, Woesearchaeaota, DPANN, Archaea

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18150..19343
-----------------
DNA (1194bp)
protein (398aa)
peptidase m50 id=5050972 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
peptidase m50 Tax=AR18
Peptidase M50
rifcsplowo2_01_scaffold_5822_28
unknown

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19504..19596
-----------------
DNA (93bp)
protein (31aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5822_29
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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19705..20508
-----------------
DNA (804bp)
protein (268aa)
Hydrolase, TatD family; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RBG_13_Woesearchaeota_36_6_curated
Hydrolase, TatD family n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYL3_METFV id=5103022 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Hydrolase, TatD family
rifcsplowo2_01_scaffold_5822_30
unknown

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comp(20618..21205)
-----------------
DNA (588bp)
protein (196aa)
Metallophosphoesterase n=2 Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWC7_9EURY id=5103021 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Metallophosphoesterase n=2 Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWC7_9EURY Tax=AR20
Metallophosphoesterase
Displaying items 1-30 of 40 in total

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