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rifcsplowo2_01_scaffold_6072

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_6072_1
unknown

Not on your lists

comp(250..426)
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6072_2
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(423..638)
-----------------
DNA (216bp)
protein (72aa)
Tax=AR19
rifcsplowo2_01_scaffold_6072_3
GWB1_OP11_44_6, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(993..1403)
-----------------
DNA (411bp)
protein (137aa)
PIN domain protein {ECO:0000313|EMBL:KKT71668.1}; TaxID=1618384 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWB1_44_6.;"
hypothetical protein id=5044906 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
PilT protein domain-containing protein
rifcsplowo2_01_scaffold_6072_4

Not on your lists

comp(1413..1667)
-----------------
DNA (255bp)
protein (85aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036DBC9D
SpoVT/AbrB family transcription regulator {ECO:0000313|EMBL:KHO46003.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
SpoVT/AbrB domain-containing protein
rifcsplowo2_01_scaffold_6072_5

Not on your lists

comp(2051..3040)
-----------------
DNA (990bp)
protein (330aa)
Deoxyhypusine synthase, deoxyhypusine synthase {ECO:0000313|EMBL:KHO54835.1}; EC=2.5.1.46 {ECO:0000313|EMBL:KHO54835.1};; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
deoxyhypusine synthase, putative (EC:2.5.1.46); K00809 deoxyhypusine synthase [EC:2.5.1.46] id=5048269 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
deoxyhypusine synthase
rifcsplowo2_01_scaffold_6072_6
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(3106..3849)
-----------------
DNA (744bp)
protein (248aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31) Tax=CG_Pacearch_06
uppS; undecaprenyl diphosphate synthase; K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] id=27927 bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
uppS; UDP pyrophosphate synthetase
rifcsplowo2_01_scaffold_6072_7
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3828..4124)
-----------------
DNA (297bp)
protein (99aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae
Acylphosphatase n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YBR7_9DELT
acylphosphatase
rifcsplowo2_01_scaffold_6072_8
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(4126..5187)
-----------------
DNA (1062bp)
protein (354aa)
hypothetical protein
Phosphoesterase, DHHA1 Tax=CG_Pacearch_03
id=5049706 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_6072_9
unknown

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5278..5616
-----------------
DNA (339bp)
protein (113aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6072_10
unknown

Not on your lists

5633..6469
-----------------
DNA (837bp)
protein (279aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6072_11
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(6711..8909)
-----------------
DNA (2199bp)
protein (733aa)
C-terminal beta-propeller domain-contain secreted protein-like protein Tax=RBG_16_Micrarchaeota_36_9_curated
Putative copper amine oxidase-like protein id=5800765 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
copper amine oxidase-like protein
rifcsplowo2_01_scaffold_6072_12
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(8967..9578)
-----------------
DNA (612bp)
protein (204aa)
ArsR family transcriptional regulator Tax=CG_Pacearch_05
ArsR family transcriptional regulator id=5050187 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ArsR family transcriptional regulator
rifcsplowo2_01_scaffold_6072_13
GWC2_OD1_48_17, Parcubacteria, Bacteria

Not on your lists

comp(9796..11649)
-----------------
DNA (1854bp)
protein (618aa)
Tax=GWC2_OD1_48_17
rifcsplowo2_01_scaffold_6072_14
unknown

Not on your lists

comp(11640..12656)
-----------------
DNA (1017bp)
protein (339aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6072_15
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

12873..13571
-----------------
DNA (699bp)
protein (233aa)
putative integral membrane protein; K08984 putative membrane protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
hypothetical protein; K08984 putative membrane protein id=5048693 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_6072_16
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

13608..13805
-----------------
DNA (198bp)
protein (66aa)
Marine sediment metagenome DNA, contig: S06H3_L01137 Tax=CG_Pacearch_03
rifcsplowo2_01_scaffold_6072_17
Acinetobacter sp. ADP1, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13977..14912
-----------------
DNA (936bp)
protein (312aa)
Uncharacterized protein n=2 Tax=Acinetobacter RepID=Q6FE00_ACIAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAG67708.1}; TaxID=62977 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter baylyi
rifcsplowo2_01_scaffold_6072_18
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

14950..16116
-----------------
DNA (1167bp)
protein (389aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MQP4_9EURY
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein
rifcsplowo2_01_scaffold_6072_19
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(16319..17425)
-----------------
DNA (1107bp)
protein (369aa)
Twitching motility protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H089_CELFA
pilus retraction protein PilT Tax=RBG_16_Planctomycetes_43_13_curated
twitching motility protein
rifcsplowo2_01_scaffold_6072_20
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(17581..18135)
-----------------
DNA (555bp)
protein (185aa)
TATA-box binding protein (TBP), component of TFIID and TFIIIB Tax=CG_Pacearch_06
2-alkenal reductase; K03120 transcription initiation factor TFIID TATA-box-binding protein id=5048857 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
TATA-box-binding protein
rifcsplowo2_01_scaffold_6072_21
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(18280..19977)
-----------------
DNA (1698bp)
protein (566aa)
hypothetical protein; K10747 DNA ligase 1 [EC:6.5.1.1] Tax=CG_Pacearch_03
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376C7D7
ATP-dependent DNA ligase
rifcsplowo2_01_scaffold_6072_22
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(20530..21000)
-----------------
DNA (471bp)
protein (157aa)
HEPN domain protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z0X7_9EURY
HEPN domain-containing protein Tax=CG_Woesearch_01
HEPN domain-containing protein
rifcsplowo2_01_scaffold_6072_23
R_RIF_OD1_06_33_9, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(20990..21565)
-----------------
DNA (576bp)
protein (192aa)
hypothetical protein
DNA polymerase beta domain protein region Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_9_curated
id=5103861 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_6072_24
Flavobacteria bacterium MS024-2A, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21918..24173)
-----------------
DNA (2256bp)
protein (752aa)
Cadherin n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BH93_9BACT
Cadherin {ECO:0000313|EMBL:EEG42446.1}; Flags: Precursor;; TaxID=487796 species="Bacteria; Bacteroidetes; Flavobacteriia.;" source="Flavobacteria bacterium (strain MS024-2A).;"
rifcsplowo2_01_scaffold_6072_25
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(24240..24929)
-----------------
DNA (690bp)
protein (230aa)
DNA repair and recombination protein RadB n=1 Tax=nanoarchaeote Nst1 RepID=R1G2W9_9ARCH
radB; DNA repair and recombination protein RadB; K04484 DNA repair protein RadB Tax=CG_Pacearch_03
radB; DNA repair and recombination protein RadB
rifcsplowo2_01_scaffold_6072_26
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(24986..25234)
-----------------
DNA (249bp)
protein (83aa)
Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_6072_27

Not on your lists

25479..26276
-----------------
DNA (798bp)
protein (266aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAJ1_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39121.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
transposase
rifcsplowo2_01_scaffold_6072_28
unknown

Not on your lists

comp(26340..26585)
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6072_29
unknown

Not on your lists

comp(26687..26953)
-----------------
DNA (267bp)
protein (89aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6072_30
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(27169..27819)
-----------------
DNA (651bp)
protein (217aa)
id=5044968 Tax=CG_Pacearch_01
id=5044968 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Displaying items 1-30 of 45 in total

View Taxonomy