ggKbase home page

rifcsplowo2_01_scaffold_6985

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_6985_1
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


164..1195
-----------------
DNA (1032bp)
protein (344aa)
protein kinase Tax=CG_Pacearch_03
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog id=5800645 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
protein kinase
rifcsplowo2_01_scaffold_6985_2
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


1540..1848
-----------------
DNA (309bp)
protein (103aa)
50S ribosomal protein L7Ae n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KPX8_ARCVS
50S ribosomal protein L7Ae; K02936 large subunit ribosomal protein L7Ae Tax=CG_Pacearch_03
50S ribosomal protein L7
rifcsplowo2_01_scaffold_6985_3
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


1860..2156
-----------------
DNA (297bp)
protein (99aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003790FD9
rps28e; 30S ribosomal protein S28e; K02979 small subunit ribosomal protein S28e Tax=CG_Pacearch_02
30S ribosomal protein S28e
rifcsplowo2_01_scaffold_6985_4
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


2156..2461
-----------------
DNA (306bp)
protein (102aa)
50S ribosomal protein L24e n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMF3_ACIS0
50S ribosomal protein L24; K02896 large subunit ribosomal protein L24e Tax=CG_Pacearch_02
ribosomal protein L24E
rifcsplowo2_01_scaffold_6985_5
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

2815..7686
-----------------
DNA (4872bp)
protein (1624aa)
DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=AR19
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI000344DD49 rbh
gyrB; DNA gyrase B subunit
rifcsplowo2_01_scaffold_6985_6
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


7688..10249
-----------------
DNA (2562bp)
protein (854aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=CG_Pacearch_06
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A id=1830187 bin=GWB2_Elusimicrobium_63_22 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
rifcsplowo2_01_scaffold_6985_7
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(10378..13530)
-----------------
DNA (3153bp)
protein (1051aa)
chitinase; K01183 chitinase [EC:3.2.1.14] Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
hypothetical protein
rifcsplowo2_01_scaffold_6985_8
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(13848..14183)
-----------------
DNA (336bp)
protein (112aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EX82_9BACT
hypothetical protein Tax=CG_Pacearch_03
hypothetical protein
rifcsplowo2_01_scaffold_6985_9
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(14180..14476)
-----------------
DNA (297bp)
protein (99aa)
DNA polymerase beta domain-containing protein; K07075 Tax=CG_Pacearch_05
DNA polymerase subunit beta; K07075 id=5095548 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
DNA polymerase beta domain-containing protein
rifcsplowo2_01_scaffold_6985_10
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

15052..15792
-----------------
DNA (741bp)
protein (247aa)
TrkA-N domain protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XEK5_THEPJ
TrkA-N domain-containing protein Tax=CG_Micra_06
TrkA-N domain-containing protein
rifcsplowo2_01_scaffold_6985_11
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

16017..16223
-----------------
DNA (207bp)
protein (69aa)
hypothetical protein
id=5102995 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_6985_12
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

16211..16549
-----------------
DNA (339bp)
protein (113aa)
hypothetical protein
id=5102994 Tax=CG_Pacearch_02
id=5102994 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_6985_13

Not on your lists

comp(16783..19026)
-----------------
DNA (2244bp)
protein (748aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F0K3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE16083.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
asnB; asparagine synthetase B
rifcsplowo2_01_scaffold_6985_14
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

19114..19851
-----------------
DNA (738bp)
protein (246aa)
transcriptional regulator TrmB id=5046026 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
transcriptional regulator TrmB Tax=AR4
Transcriptional regulator, TrmB
rifcsplowo2_01_scaffold_6985_15
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(19915..20190)
-----------------
DNA (276bp)
protein (92aa)
Tax=AR19
rifcsplowo2_01_scaffold_6985_16
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(20190..20396)
-----------------
DNA (207bp)
protein (69aa)
Tax=AR19
rifcsplowo2_01_scaffold_6985_17
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

20716..21654
-----------------
DNA (939bp)
protein (313aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037C1C8F
hypothetical protein Tax=CG_Pacearch_03
rifcsplowo2_01_scaffold_6985_18
R_OD1_48_10, Parcubacteria, Bacteria

Not on your lists

22412..23122
-----------------
DNA (711bp)
protein (237aa)
putative ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_01_FULL_OD1_48_10_curated
rifcsplowo2_01_scaffold_6985_19
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

23507..24058
-----------------
DNA (552bp)
protein (184aa)
Putative uncharacterized protein (Fragment) n=1 Tax=sediment metagenome RepID=D9PHA1_9ZZZZ
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein
Displaying 19 items

View Taxonomy