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rifcsplowo2_01_scaffold_24857

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_24857_1

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comp(1..165)
-----------------
DNA (165bp)
protein (55aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GSS6_9ZZZZ
30S ribosomal protein S3 {ECO:0000313|EMBL:AJS12176.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rifcsplowo2_01_scaffold_24857_2

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comp(166..798)
-----------------
DNA (633bp)
protein (211aa)
50S ribosomal protein L22P n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASJ9_9ARCH
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22
rifcsplowo2_01_scaffold_24857_3

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comp(799..1203)
-----------------
DNA (405bp)
protein (135aa)
30S ribosomal protein S19P n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P7M2_METFA
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps19p; 30S ribosomal protein S19
rifcsplowo2_01_scaffold_24857_4

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comp(1203..1904)
-----------------
DNA (702bp)
protein (234aa)
50S ribosomal protein L2P {ECO:0000313|EMBL:AJS12179.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L2 id=5800061 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rpl2p; 50S ribosomal protein L2P
rifcsplowo2_01_scaffold_24857_5
unknown

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comp(1905..2192)
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24857_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(2194..2436)
-----------------
DNA (243bp)
protein (81aa)
50S ribosomal protein L23P n=3 Tax=Thermococcus RepID=RL23_PYRKO id=5103254 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L23P; K02892 large subunit ribosomal protein L23 Tax=RBG_13_Pacearchaeota_36_9_curated
50S ribosomal protein L23P
rifcsplowo2_01_scaffold_24857_7

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comp(2426..3202)
-----------------
DNA (777bp)
protein (259aa)
50S ribosomal protein L4 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL4_NANEQ id=5103253 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS12180.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L4
rifcsplowo2_01_scaffold_24857_8

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comp(3199..4143)
-----------------
DNA (945bp)
protein (315aa)
50S ribosomal protein L3 n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXT2_FERPA id=5103252 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L3P {ECO:0000313|EMBL:AJS12181.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3
rifcsplowo2_01_scaffold_24857_9
AR19, Pacearchaeaota, DPANN, Archaea

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comp(4325..4939)
-----------------
DNA (615bp)
protein (205aa)
Tax=AR19
rifcsplowo2_01_scaffold_24857_10
unknown

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comp(4936..5367)
-----------------
DNA (432bp)
protein (144aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24857_11
unknown

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comp(5426..5641)
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24857_12
CG_Pacearch_03, Pacearchaeota, Archaea

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comp(5607..6338)
-----------------
DNA (732bp)
protein (244aa)
DNA polymerase sliding clamp Tax=CG_Pacearch_03
DNA polymerase sliding clamp; K04802 proliferating cell nuclear antigen id=5046287 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA polymerase sliding clamp
rifcsplowo2_01_scaffold_24857_13
CG_Pacearch_03, Pacearchaeota, Archaea

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6439..8040
-----------------
DNA (1602bp)
protein (534aa)
hypothetical protein; K00992 [EC:2.7.7.-] Tax=CG_Pacearch_03
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B8391
hypothetical protein
Displaying 13 items

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