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rifcsplowo2_01_scaffold_41415

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_41415_1
unknown

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177..605
-----------------
DNA (429bp)
protein (143aa)

This feature has no annotations

rifcsplowo2_01_scaffold_41415_2
CG_Pacearch_03, Pacearchaeota, Archaea

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994..1350
-----------------
DNA (357bp)
protein (119aa)
translation initiation factor IF-1 Tax=CG_Pacearch_03
Translation initiation factor 1A id=5800615 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Translation initiation factor 1A
rifcsplowo2_01_scaffold_41415_3
CG_Berkel_02, Berkelbacteria, Bacteria

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1385..4288
-----------------
DNA (2904bp)
protein (968aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4) Tax=CG_Berkel_02
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K2GAE4_9BACT
rifcsplowo2_01_scaffold_41415_4
unknown

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4278..4499
-----------------
DNA (222bp)
protein (74aa)

This feature has no annotations

rifcsplowo2_01_scaffold_41415_5

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4525..4761
-----------------
DNA (237bp)
protein (79aa)
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:KHO54022.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
GCN5-related N-acetyltransferase id=5048304 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
N-acetyltransferase GCN5
rifcsplowo2_01_scaffold_41415_6

Not on your lists

4826..5122
-----------------
DNA (297bp)
protein (99aa)
SpoVT/AbrB family transcription regulator id=5044907 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
SpoVT/AbrB family transcription regulator {ECO:0000313|EMBL:KHO46003.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
SpoVT/AbrB family transcription regulator
rifcsplowo2_01_scaffold_41415_7
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5097..5507
-----------------
DNA (411bp)
protein (137aa)
PilT protein domain protein n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EA35_9FIRM
hypothetical protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
hypothetical protein
rifcsplowo2_01_scaffold_41415_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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5821..6216
-----------------
DNA (396bp)
protein (132aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362D490
Bacterioopsin activator HTH domain-containing protein Tax=RBG_13_Pacearchaeota_36_9_curated
transcription regulator-like protein
rifcsplowo2_01_scaffold_41415_9
unknown

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6255..6494
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

rifcsplowo2_01_scaffold_41415_10
Sulfolobus islandicus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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6491..6883
-----------------
DNA (393bp)
protein (131aa)
PilT protein domain protein n=1 Tax=Sulfolobus islandicus (strain L.D.8.5 / Lassen #2) RepID=D2PI75_SULID
PilT protein domain-containing protein
PilT protein domain protein {ECO:0000313|EMBL:ACP44964.1}; TaxID=439386 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus islandicus (strain
rifcsplowo2_01_scaffold_41415_11
unknown

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6956..7858
-----------------
DNA (903bp)
protein (301aa)

This feature has no annotations

rifcsplowo2_01_scaffold_41415_12
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7858..8196
-----------------
DNA (339bp)
protein (113aa)
Export-related chaperone CsaA n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CD27_SPHS2
export-related chaperone CsaA
Export-related chaperone CsaA {ECO:0000313|EMBL:ADZ77638.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphin
rifcsplowo2_01_scaffold_41415_13
unknown

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8177..8740
-----------------
DNA (564bp)
protein (188aa)

This feature has no annotations

rifcsplowo2_01_scaffold_41415_14
unknown

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8827..9939
-----------------
DNA (1113bp)
protein (371aa)

This feature has no annotations

Displaying 14 items

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