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rifcsplowo2_01_scaffold_12063

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_12063_1
unknown

Not on your lists

160..570
-----------------
DNA (411bp)
protein (137aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12063_2
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

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comp(578..991)
-----------------
DNA (414bp)
protein (138aa)
Uncharacterized protein n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KEP7_ELUMP
hypothetical protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
hypothetical protein
rifcsplowo2_01_scaffold_12063_3
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

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comp(1209..1934)
-----------------
DNA (726bp)
protein (242aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS42432.1}; TaxID=1618378 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWA2_42_17.;"
Radical SAM enzymes id=85373 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
rifcsplowo2_01_scaffold_12063_4
AR13, Pacearchaeaota, DPANN, Archaea

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comp(1922..2791)
-----------------
DNA (870bp)
protein (290aa)
hypothetical protein Tax=AR13
Radical SAM enzymes id=85373 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
rifcsplowo2_01_scaffold_12063_5
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(2766..3332)
-----------------
DNA (567bp)
protein (189aa)
Putative ATPase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CBR5_9FLAO
ATPase-like protein Tax=RBG_13_Pacearchaeota_33_26_curated
hypothetical protein
rifcsplowo2_01_scaffold_12063_6
AR13, Pacearchaeaota, DPANN, Archaea

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3437..4270
-----------------
DNA (834bp)
protein (278aa)
hypothetical protein Tax=AR13
rifcsplowo2_01_scaffold_12063_7
unknown

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4326..4706
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12063_8
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(4692..5588)
-----------------
DNA (897bp)
protein (299aa)
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=CG_Pacearch_06
Heat shock protein HtpX (EC:3.4.24.-)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376731D
rifcsplowo2_01_scaffold_12063_9
Parcubacteria bacterium GW2011_GWE2_37_8, Parcubacteria, Bacteria

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comp(5620..6645)
-----------------
DNA (1026bp)
protein (342aa)
Gll3938 protein id=3012770 bin=GWC1_OD1_38_17 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Homoserine kinase {ECO:0000313|EMBL:KKQ43916.1}; TaxID=1618948 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_37_8.;"
homoserine kinase
rifcsplowo2_01_scaffold_12063_10
CG_Woesearch_02, Woesearchaeota, Archaea

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6740..7645
-----------------
DNA (906bp)
protein (302aa)
hypothetical protein Tax=CG_Woesearch_02
Uncharacterized protein id=5042140 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
rifcsplowo2_01_scaffold_12063_11
R_RIF_OD1_12_45_17b, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

7715..9463
-----------------
DNA (1749bp)
protein (583aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003749429
radical SAM domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_45_17b_curated
radical SAM domain-containing protein
rifcsplowo2_01_scaffold_12063_12
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(9485..10039)
-----------------
DNA (555bp)
protein (185aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E1242
LemA family protein; K03744 LemA protein Tax=CG_Pacearch_06
LemA protein
rifcsplowo2_01_scaffold_12063_13
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(10048..11529)
-----------------
DNA (1482bp)
protein (494aa)
Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_12063_14
AR15, Woesearchaeaota, DPANN, Archaea

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11664..12269
-----------------
DNA (606bp)
protein (202aa)
Methyltransferase type 11 id=5800021 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Methyltransferase type 11 Tax=AR15
methyltransferase type 11
rifcsplowo2_01_scaffold_12063_15
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(12600..13322)
-----------------
DNA (723bp)
protein (241aa)
UPI0001D412FB related cluster n=1 Tax=unknown RepID=UPI0001D412FB id=41155 bin=ACD37 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
glycosyl transferase family 2; K07027 Tax=CG_Pacearch_06
glycosyl transferase family protein
rifcsplowo2_01_scaffold_12063_16
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(13324..14214)
-----------------
DNA (891bp)
protein (297aa)
Transaldolase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U5M3_9EURY
Transaldolase {ECO:0000313|EMBL:EMR74110.1}; TaxID=1198116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-N05.;"
transaldolase
rifcsplowo2_01_scaffold_12063_17

Not on your lists

comp(14198..14941)
-----------------
DNA (744bp)
protein (248aa)
gmhA; sedoheptulose 7-phosphate isomerase (EC:5.3.1.-)
Sedoheptulose 7-phosphate isomerase n=1 Tax=uncultured bacterium RepID=K2DUQ4_9BACT
Marine sediment metagenome DNA, contig: S01H1_L06938 {ECO:0000313|EMBL:GAF67212.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_01_scaffold_12063_18
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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comp(14943..15107)
-----------------
DNA (165bp)
protein (55aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-J15 RepID=UPI00036CFCAE
GHMP kinase Tax=GWA2_WOR_2_47_8_curated
kinase
Displaying 18 items

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