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rifcsplowo2_01_scaffold_12169

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_12169_1
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(378..989)
-----------------
DNA (612bp)
protein (204aa)
RNA base methyltransferase family enzyme n=1 Tax=nanoarchaeote Nst1 RepID=R1FT05_9ARCH id=5103444 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Pacearch_06
RNA base methyltransferase family enzyme
rifcsplowo2_01_scaffold_12169_2
RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

1047..1652
-----------------
DNA (606bp)
protein (202aa)
DedA family protein Tax=RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated
DedA family protein id=5097723 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
rifcsplowo2_01_scaffold_12169_3
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(1807..2667)
-----------------
DNA (861bp)
protein (287aa)
pseudouridylate synthase TruB domain protein; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Tax=RBG_16_Pacearchaeota_35_8_curated
H/ACA RNA-protein complex component Cbf5p (EC:5.4.99.12); K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] id=5046920 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
pseudouridylate synthase TruB domain protein
rifcsplowo2_01_scaffold_12169_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(2667..3452)
-----------------
DNA (786bp)
protein (262aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_12169_5
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(3449..4150)
-----------------
DNA (702bp)
protein (234aa)
Putative DNA alkylation repair enzyme Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
ial:IALB_0403 Putative DNA alkylation repair enzyme id=719499 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
DNA alkylation repair enzyme superfamily
rifcsplowo2_01_scaffold_12169_6
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(4187..4708)
-----------------
DNA (522bp)
protein (174aa)
50S ribosomal protein L31e; K02910 large subunit ribosomal protein L31e Tax=CG_Pacearch_03
50S ribosomal protein L31e; K02910 large subunit ribosomal protein L31e id=5044950 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L31e
rifcsplowo2_01_scaffold_12169_7
unknown

Not on your lists

comp(4710..5108)
-----------------
DNA (399bp)
protein (133aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12169_8
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(5110..5310)
-----------------
DNA (201bp)
protein (67aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036C1FE9
hypothetical protein Tax=CG_Pacearch_03
rifcsplowo2_01_scaffold_12169_9
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


comp(5307..5717)
-----------------
DNA (411bp)
protein (137aa)
30S ribosomal protein S19e n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FH44_9EURY
ribosomal protein S19e; K02966 small subunit ribosomal protein S19e Tax=CG_Pacearch_02
RPS19A; 30S ribosomal protein S19
rifcsplowo2_01_scaffold_12169_10
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(5753..6001)
-----------------
DNA (249bp)
protein (83aa)
Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_12169_11
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(5998..6591)
-----------------
DNA (594bp)
protein (198aa)
Putative RNA-binding protein, eukaryotic snRNP-like protein n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=H9ZZX5_FERFK
hypothetical protein Tax=CG_Pacearch_03
hypothetical protein
rifcsplowo2_01_scaffold_12169_12
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(6625..7200)
-----------------
DNA (576bp)
protein (192aa)
Tax=CG_Pacearch_03
rifcsplowo2_01_scaffold_12169_13
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(7202..7483)
-----------------
DNA (282bp)
protein (94aa)
Tax=CG_Pacearch_03
rifcsplowo2_01_scaffold_12169_14
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

8261..8926
-----------------
DNA (666bp)
protein (222aa)
proteasome endopeptidase complex subunit beta (EC:3.4.25.1); K03433 proteasome beta subunit [EC:3.4.25.1] Tax=CG_Pacearch_06
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003791C71
Proteasome subunit beta
rifcsplowo2_01_scaffold_12169_15
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

8941..10836
-----------------
DNA (1896bp)
protein (632aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036EAF14
metal-dependent RNase; K07041 Tax=CG_Pacearch_03
kh-domain/beta-lactamase-domain-containing protein
rifcsplowo2_01_scaffold_12169_16
unknown

Not on your lists

comp(10844..11365)
-----------------
DNA (522bp)
protein (174aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12169_17
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(11349..12146)
-----------------
DNA (798bp)
protein (266aa)
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein id=5042335 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Displaying 17 items

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