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rifcsplowo2_01_scaffold_46015

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_46015_1
unknown

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comp(1..222)
-----------------
DNA (222bp)
protein (74aa)

This feature has no annotations

rifcsplowo2_01_scaffold_46015_2

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287..1471
-----------------
DNA (1185bp)
protein (395aa)
glycosyltransferase id=5042282 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Glycosyltransferase {ECO:0000313|EMBL:KHO46780.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
glycosyl transferase
rifcsplowo2_01_scaffold_46015_3

Not on your lists

comp(1458..2249)
-----------------
DNA (792bp)
protein (264aa)
Carboxylesterase (Est-1) n=1 Tax=uncultured bacterium RepID=K2DLB5_9BACT
Carboxylesterase (Est-1) {ECO:0000313|EMBL:KKR03729.1}; TaxID=1618962 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_13b.;"
alpha/beta hydrolase
rifcsplowo2_01_scaffold_46015_4
zPERA2_38_36, Peregrinibacteria, Bacteria

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2320..2994
-----------------
DNA (675bp)
protein (225aa)
family 2 glycosyl transferase id=5802003 bin=PER_GWA2_38_35 species=PER_GWA2_38_35 genus=PER_GWA2_38_35 taxon_order=PER_GWA2_38_35 taxon_class=PER_GWA2_38_35 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
Family 2 glycosyl transferase {ECO:0000313|EMBL:KKQ69986.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
glycosyl transferase family protein
rifcsplowo2_01_scaffold_46015_5

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comp(3212..3805)
-----------------
DNA (594bp)
protein (198aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO48791.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
hypothetical protein id=5094954 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
rifcsplowo2_01_scaffold_46015_6
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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3886..4944
-----------------
DNA (1059bp)
protein (353aa)
family 2 glycosyl transferase Tax=RBG_13_Pacearchaeota_33_26_curated
hypothetical protein id=5050653 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
teichoic acid biosynthesis-like protein
rifcsplowo2_01_scaffold_46015_7

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comp(5052..5303)
-----------------
DNA (252bp)
protein (84aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z0R4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD48790.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
rifcsplowo2_01_scaffold_46015_8
CG_Pacearch_05, Pacearchaeota, Archaea

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5502..6476
-----------------
DNA (975bp)
protein (325aa)
PHP domain protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0A1_DICTD id=5103143 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA and RNA helicase Tax=CG_Pacearch_05
PHP protein
rifcsplowo2_01_scaffold_46015_9
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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6512..7240
-----------------
DNA (729bp)
protein (243aa)
id=5048311 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5048311 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_46015_10
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(7258..7386)
-----------------
DNA (129bp)
protein (43aa)
pyrophosphatase Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_46015_11
unknown

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comp(7532..7801)
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

rifcsplowo2_01_scaffold_46015_12
unknown

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comp(7779..7916)
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

rifcsplowo2_01_scaffold_46015_13
CG_Pacearch_02, Pacearchaeota, Archaea

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comp(7916..8746)
-----------------
DNA (831bp)
protein (277aa)
translation initiation factor 2, alpha subunit; K03237 translation initiation factor 2 subunit 1 Tax=CG_Pacearch_02
eif2A; translation initiation factor IF-2 subunit alpha; K03237 translation initiation factor 2 subunit 1 id=5050676 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_46015_14
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(9117..10187)
-----------------
DNA (1071bp)
protein (357aa)
Phosphoesterase, RecJ-like protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RBX6_9EURY id=5103092 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
recJ-like; ss-DNA-specific exonuclease recj related; K07463 archaea-specific RecJ-like exonuclease Tax=CG_Pacearch_03
Phosphoesterase, RecJ-like protein
Displaying 14 items

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