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rifcsplowo2_01_scaffold_46216

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_46216_1
unknown

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comp(132..989)
-----------------
DNA (858bp)
protein (286aa)

This feature has no annotations

rifcsplowo2_01_scaffold_46216_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1101..1853
-----------------
DNA (753bp)
protein (251aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000378592A
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AIF83144.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Cand
rifcsplowo2_01_scaffold_46216_3
Kingella kingae, Kingella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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1907..2776
-----------------
DNA (870bp)
protein (290aa)
Histone deacetylase {ECO:0000313|EMBL:EGK08404.1}; EC=3.5.1.98 {ECO:0000313|EMBL:EGK08404.1};; TaxID=887327 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Kingella
Histone deacetylase n=1 Tax=Kingella kingae ATCC 23330 RepID=F5S883_9NEIS
deacetylase
rifcsplowo2_01_scaffold_46216_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(3157..3645)
-----------------
DNA (489bp)
protein (163aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
rifcsplowo2_01_scaffold_46216_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(3651..3947)
-----------------
DNA (297bp)
protein (99aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RX62_FERPA
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
rifcsplowo2_01_scaffold_46216_6
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(3982..6930)
-----------------
DNA (2949bp)
protein (983aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RBG_13_Pacearchaeota_33_26_curated
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] id=5241347 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
rifcsplowo2_01_scaffold_46216_7
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(6893..7783)
-----------------
DNA (891bp)
protein (297aa)
Tax=CG_Pacearch_05
rifcsplowo2_01_scaffold_46216_8
AR9, Woesearchaeaota, DPANN, Archaea

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comp(7846..8190)
-----------------
DNA (345bp)
protein (115aa)
Tax=AR9
rifcsplowo2_01_scaffold_46216_9

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8420..9004
-----------------
DNA (585bp)
protein (195aa)
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA {ECO:0000313|EMBL:KHO49399.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5048744 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcriptional regulator
rifcsplowo2_01_scaffold_46216_10
CG_Pacearch_02, Pacearchaeota, Archaea

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comp(8983..9396)
-----------------
DNA (414bp)
protein (138aa)
Protein archease n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C6H1_9CREN
hypothetical protein Tax=CG_Pacearch_02
archease
rifcsplowo2_01_scaffold_46216_11
CG_Pacearch_03, Pacearchaeota, Archaea

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9427..10428
-----------------
DNA (1002bp)
protein (334aa)
Tax=CG_Pacearch_03
Displaying 11 items

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