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rifcsplowo2_01_scaffold_81144

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_81144_1
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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234..1058
-----------------
DNA (825bp)
protein (275aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein id=5048280 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_81144_2
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1351..2616)
-----------------
DNA (1266bp)
protein (422aa)
Iron-sulfur cluster-binding protein, Rieske family n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09CX4_STIAD
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KFA92661.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="C
rieske family iron-sulfur cluster-binding protein
rifcsplowo2_01_scaffold_81144_3

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comp(2750..3424)
-----------------
DNA (675bp)
protein (225aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B73A26
Thiamine biosynthesis protein ThiH {ECO:0000313|EMBL:KKT51559.1}; TaxID=1618930 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_22.;"
biotin and thiamin synthesis associated protein
rifcsplowo2_01_scaffold_81144_4
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

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comp(3631..4035)
-----------------
DNA (405bp)
protein (135aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B73A26
hypothetical protein Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
rifcsplowo2_01_scaffold_81144_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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4151..5122
-----------------
DNA (972bp)
protein (324aa)
Transcriptional regulator n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TC38_9EURY
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
rifcsplowo2_01_scaffold_81144_6
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5119..6909)
-----------------
DNA (1791bp)
protein (597aa)
UvrABC system protein B n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1PDK2_METMZ
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
Excinuclease ABC subunit B
rifcsplowo2_01_scaffold_81144_7
RIFOXYD1_FULL_RIF_OD1_10_39_35_curated, RIF-OD1-1, Parcubacteria, Bacteria

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comp(6863..7090)
-----------------
DNA (228bp)
protein (76aa)
UvrABC system protein B n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WMW1_9SYNE
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=RIFOXYD1_FULL_RIF_OD1_10_39_35_curated
excinuclease ABC helicase subunit B UvrB
rifcsplowo2_01_scaffold_81144_8

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comp(7087..8589)
-----------------
DNA (1503bp)
protein (501aa)
Excinuclease ABC, subunit C n=1 Tax=uncultured archaeon RepID=Q2Y4M1_9ARCH
Excinuclease ABC, subunit C {ECO:0000313|EMBL:CAI64244.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
uvrC; excinuclease ABC subunit C
rifcsplowo2_01_scaffold_81144_9
Methanocorpusculum labreanum, Methanocorpusculum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8573..10312)
-----------------
DNA (1740bp)
protein (580aa)
UvrABC system protein A n=1 Tax=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) RepID=A2SS40_METLZ
excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=410358 species="Ar
rifcsplowo2_01_scaffold_81144_10

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comp(10339..11388)
-----------------
DNA (1050bp)
protein (350aa)
UvrABC system protein A n=2 Tax=uncultured archaeon RepID=Q2Y4L7_9ARCH
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=115547 species="Ar
excinuclease ABC subunit A
rifcsplowo2_01_scaffold_81144_11
unknown

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comp(11742..12020)
-----------------
DNA (279bp)
protein (93aa)

This feature has no annotations

rifcsplowo2_01_scaffold_81144_12
R_RIF_OD1_06_33_9, RIF-OD1-6, Parcubacteria, Bacteria

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comp(12341..13228)
-----------------
DNA (888bp)
protein (296aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_9_curated
hypothetical protein id=89216 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
rifcsplowo2_01_scaffold_81144_13
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(13320..13511)
-----------------
DNA (192bp)
protein (64aa)
cold shock DNA binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=CG_Pacearch_05
Cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) id=5041610 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Cold shock DNA binding domain protein
rifcsplowo2_01_scaffold_81144_14
unknown

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13788..14510
-----------------
DNA (723bp)
protein (241aa)

This feature has no annotations

rifcsplowo2_01_scaffold_81144_15
GWB1_OP11_44_6, Collierbacteria, Microgenomates, Bacteria

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comp(14841..15071)
-----------------
DNA (231bp)
protein (77aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJ33_DESK7
PIN domain protein {ECO:0000313|EMBL:KKT71668.1}; TaxID=1618384 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWB1_44_6.;"
hypothetical protein
rifcsplowo2_01_scaffold_81144_16
unknown

Not on your lists

comp(15243..15545)
-----------------
DNA (303bp)
protein (101aa)

This feature has no annotations

Displaying 16 items

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