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rifcsplowo2_01_scaffold_10054_20

Organism: RIFCSPLOWO2_01_FULL_Pacearchaeota_37_9

partial RP 27 / 55 MC: 7 BSCG 15 / 51 MC: 1 ASCG 27 / 38
Location: comp(18152..18478)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase, subunit m (EC:2.7.7.6); K03057 transcription elongation factor Tax=CG_Pacearch_03 similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 103.0
  • Bit_score: 125
  • Evalue 5.20e-26
DNA-directed RNA polymerase subunit id=5799719 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 107.0
  • Bit_score: 111
  • Evalue 7.30e-22
transcription termination factor Tfs similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 102.0
  • Bit_score: 109
  • Evalue 7.70e-22

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Taxonomy

CG_Pacearch_03 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 327
GAGACATCTAAAAAGCGAATGGAATTTTGTGAAAAATGTGGCGGTATAATAAGAATTGAAGGAGATAAGGCTGCATGTGCAAGTTGTGGCACTAAAGCCAAGAAAAAACCAAAGATAGAGGTTTCTGAAAAAATAAACCAACAGGAAAAAATAGAAGTTATAAAAGAAGGCTCTGATAATGTTTACCCTCTTATTGCGATAGAGTGCCCGAAATGCGGACATACAAGAGGCTATTTCTGGACTACACAAACAAGAGCTTCAGATGAGCCTGAGACGAAATTTTTCAAGTGTGAGAAATGCAAATATACCTGGAGAAAGTATAGATAA
PROTEIN sequence
Length: 109
ETSKKRMEFCEKCGGIIRIEGDKAACASCGTKAKKKPKIEVSEKINQQEKIEVIKEGSDNVYPLIAIECPKCGHTRGYFWTTQTRASDEPETKFFKCEKCKYTWRKYR*