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rifcsplowo2_01_scaffold_10054

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_10054_1
AR13, Pacearchaeaota, DPANN, Archaea

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282..584
-----------------
DNA (303bp)
protein (101aa)
hypothetical protein Tax=AR13
rifcsplowo2_01_scaffold_10054_2
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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796..2247
-----------------
DNA (1452bp)
protein (484aa)
hypothetical protein
id=5102950 Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
id=5102950 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_10054_3
unknown

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2204..2368
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10054_4
RIFOXYC1_FULL_RIF_OD1_06_38_18_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

2484..3617
-----------------
DNA (1134bp)
protein (378aa)
Glycosyl transferase family 2 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZQ4_CONWI id=5102946 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
glycosyl transferase family 2 protein Tax=RIFOXYC1_FULL_RIF_OD1_06_38_18_curated
Glycosyl transferase family 2
rifcsplowo2_01_scaffold_10054_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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3614..4726
-----------------
DNA (1113bp)
protein (371aa)
Glycosyltransferase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6Q1_METCZ
glycosyltransferase Tax=RBG_13_Pacearchaeota_36_9_curated
Mannosyltransferase WbkA
rifcsplowo2_01_scaffold_10054_6
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

4728..5762
-----------------
DNA (1035bp)
protein (345aa)
Tax=RBG_13_Pacearchaeota_33_26_curated
rifcsplowo2_01_scaffold_10054_7
unknown

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comp(5947..6069)
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10054_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(6265..6732)
-----------------
DNA (468bp)
protein (156aa)
Protein containing Nucleotide binding protein, PINc domain n=1 Tax=sediment metagenome RepID=D9PJC5_9ZZZZ
putative nucleotide-binding protein Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_10054_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(6750..7040)
-----------------
DNA (291bp)
protein (97aa)
Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_10054_10
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7041..7190)
-----------------
DNA (150bp)
protein (50aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
rifcsplowo2_01_scaffold_10054_11
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(7414..11634)
-----------------
DNA (4221bp)
protein (1407aa)
hypothetical protein Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
Putative uncharacterized protein id=5046322 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative outer membrane adhesin like protein
rifcsplowo2_01_scaffold_10054_12
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11624..12973)
-----------------
DNA (1350bp)
protein (450aa)
putative transcriptional regulator; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
Putative transcriptional regulator id=4244719 bin=GWC2_OP3_44_8 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
transcriptional regulator
rifcsplowo2_01_scaffold_10054_13
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(13084..13635)
-----------------
DNA (552bp)
protein (184aa)
DNA polymerase subunit beta Tax=AR19
rifcsplowo2_01_scaffold_10054_14
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

13825..14397
-----------------
DNA (573bp)
protein (191aa)
O-antigen ABC transporter, permease protein, putative n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZQ94_ACICS
polysaccharide ABC transporter permease; K01992 ABC-2 type transport system permease protein Tax=RBG_13_Pacearchaeota_36_9_curated
O-antigen ABC transporter permease
rifcsplowo2_01_scaffold_10054_15

Not on your lists

14571..15311
-----------------
DNA (741bp)
protein (247aa)
ABC transporter, ATP-binding protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8E2_9ACTO
Marine sediment metagenome DNA, contig: S06H3_C01047 {ECO:0000313|EMBL:GAH91323.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
ABC transporter ATP-binding protein
rifcsplowo2_01_scaffold_10054_16
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(15541..16152)
-----------------
DNA (612bp)
protein (204aa)
Metallophosphoesterase
Metallophosphoesterase Tax=CG_Pacearch_05
Metallophosphoesterase id=5799698 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_10054_17
unknown

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16203..16754
-----------------
DNA (552bp)
protein (184aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10054_18

Not on your lists

17176..17376
-----------------
DNA (201bp)
protein (67aa)
Marine sediment metagenome DNA, contig: S12H4_S02906 {ECO:0000313|EMBL:GAJ00880.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
regulatory protein MarR id=5046824 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_10054_19
unknown

Not on your lists

comp(17694..18089)
-----------------
DNA (396bp)
protein (132aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10054_20
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(18152..18478)
-----------------
DNA (327bp)
protein (109aa)
DNA-directed RNA polymerase, subunit m (EC:2.7.7.6); K03057 transcription elongation factor Tax=CG_Pacearch_03
DNA-directed RNA polymerase subunit id=5799719 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
transcription termination factor Tfs
Displaying 20 items

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