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rifcsplowo2_01_scaffold_8877

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_8877_1
CG_Woesearch_01, Woesearchaeota, Archaea

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305..1000
DNA (696bp) protein (232aa)
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e Tax=CG_Woesearch_01
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e id=5049181 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal protein L31e
rifcsplowo2_01_scaffold_8877_2
Parcubacteria bacterium GW2011_GWA2_46_9, Parcubacteria, Bacteria

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1083..2069
DNA (987bp) protein (329aa)
Probable tRNA pseudouridine synthase B n=13 Tax=Thermococcaceae RepID=TRUB_PYRFU id=5103295 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative tRNA pseudouridine synthase B {ECO:0000313|EMBL:KKU47144.1}; Flags: Fragment;; TaxID=1618838 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;"
putative tRNA pseudouridine synthase B
rifcsplowo2_01_scaffold_8877_3
PER_GWF2_39_17, Peregrinibacteria, Bacteria

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2194..2772
DNA (579bp) protein (193aa)
hypothetical protein; K05595 multiple antibiotic resistance protein id=5096758 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKR09096.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
hypothetical protein
rifcsplowo2_01_scaffold_8877_4
AR11, Woesearchaeaota, DPANN, Archaea

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comp(2779..3108)
DNA (330bp) protein (110aa)
Putative uncharacterized protein Tax=AR11
hypothetical protein id=5048668 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_8877_5

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3176..3442
DNA (267bp) protein (89aa)
hypothetical protein id=5048669 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45332.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_8877_6
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

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comp(3540..3914)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A5Z1_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
hypothetical protein
rifcsplowo2_01_scaffold_8877_7
CG_Woesearch_01, Woesearchaeota, Archaea

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4185..5252
DNA (1068bp) protein (356aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=CG_Woesearch_01
Cell division protein FtsZ id=5799752 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Cell division protein FtsZ
rifcsplowo2_01_scaffold_8877_8
GWA2_OP11_46_7, Microgenomates, Bacteria

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comp(5314..5574)
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU44647.1}; TaxID=1618502 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_46_7.;"
hypothetical protein; K09728 hypothetical protein id=5045726 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_8877_9
GWA2_OP11_46_7, Microgenomates, Bacteria

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comp(5826..6053)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360FC43
UPI000021CFC7 related cluster Tax=GWA2_OP11_46_7
hypothetical protein
rifcsplowo2_01_scaffold_8877_10
GWA2_OP11_46_7, Microgenomates, Bacteria

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comp(6050..6823)
DNA (774bp) protein (258aa)
3'-5' exoribonuclease {ECO:0000313|EMBL:KKU44649.1}; TaxID=1618502 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_46_7.;"
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 id=5046925 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal RNA-processing protein RRP42
rifcsplowo2_01_scaffold_8877_11
GWA2_OP11_46_7, Microgenomates, Bacteria

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comp(6816..7526)
DNA (711bp) protein (237aa)
Exosome complex exonuclease Rrp41 {ECO:0000313|EMBL:KKU44650.1}; TaxID=1618502 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_46_7.;"
3' exoribonuclease id=5800800 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
exosome complex exonuclease Rrp41
rifcsplowo2_01_scaffold_8877_12

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comp(7644..8333)
DNA (690bp) protein (230aa)
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 id=5046927 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
putative exosome complex RNA-binding protein 1
rifcsplowo2_01_scaffold_8877_13
AR11, Woesearchaeaota, DPANN, Archaea

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comp(8330..9031)
DNA (702bp) protein (234aa)
Predicted exosome subunit Tax=AR11
RNA-associated protein; K14574 ribosome maturation protein SDO1 id=5046928 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosome maturation protein SDO1-like protein
rifcsplowo2_01_scaffold_8877_14

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comp(9033..9791)
DNA (759bp) protein (253aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289};; 20S proteasome alpha subunit {ECO:0000256|HAMAP-Rule:MF_00289}; Proteasome core protein PsmA
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=5046929 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Proteasome subunit alpha
rifcsplowo2_01_scaffold_8877_15
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(9799..10167)
DNA (369bp) protein (123aa)
ribonuclease P protein component 2 (EC:3.1.26.5); K03537 ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] Tax=RBG_13_Woesearchaeota_36_6_curated
ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component 2 id=5046930 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_8877_16
unknown

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comp(10297..10488)
DNA (192bp) protein (64aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8877_17
AR9, Woesearchaeaota, DPANN, Archaea

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10658..10900
DNA (243bp) protein (81aa)
id=5041829 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsplowo2_01_scaffold_8877_18

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10897..11235
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50079.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Transcription regulator AbrB/SpoV, predicted id=5041830 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_8877_19

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comp(11241..12593)
DNA (1353bp) protein (451aa)
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase id=1250126 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Phosphomannomutase {ECO:0000313|EMBL:EQB62989.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
rifcsplowo2_01_scaffold_8877_20
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12600..12959)
DNA (360bp) protein (120aa)
Transcriptional modulator of MazE/toxin, MazF n=1 Tax=Clostridium ultunense Esp RepID=M1Z7V6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AKB24951.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
MazF family transcriptional regulator
rifcsplowo2_01_scaffold_8877_21
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12937..13194)
DNA (258bp) protein (86aa)
Putative transcription regulator AbrB/SpoV {ECO:0000313|EMBL:AIC16387.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sourc
putative transcription regulator AbrB/SpoV
rifcsplowo2_01_scaffold_8877_22
RBG_19FT_COMBO_WWE3_53_11_curated, WWE3, Bacteria

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13346..14350
DNA (1005bp) protein (335aa)
hypothetical protein Tax=RBG_19FT_COMBO_WWE3_53_11_curated
hypothetical protein id=53381 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
rifcsplowo2_01_scaffold_8877_23
unknown

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14449..14808
DNA (360bp) protein (120aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8877_24
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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14818..15075
DNA (258bp) protein (86aa)
Transcriptional regulator, ArsR family n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S4S6_METSF
transcriptional regulator, ArsR family
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADC69840.1}; TaxID=644281 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="
Displaying 24 items

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