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rifcsplowo2_01_scaffold_11574

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsplowo2_01_scaffold_11574_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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90..1568
-----------------
DNA (1479bp)
protein (493aa)
Cystathionine beta-synthase n=1 Tax=uncultured Bacteroidetes bacterium RepID=H5SK43_9BACT
cystathionine beta-synthase
rifcsplowo2_01_scaffold_11574_2
unknown

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comp(1565..2398)
-----------------
DNA (834bp)
protein (278aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11574_3
CG_Pacearch_03, Pacearchaeota, Archaea

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comp(2766..3665)
-----------------
DNA (900bp)
protein (300aa)
rifcsplowo2_01_scaffold_11574_4

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3942..4904
-----------------
DNA (963bp)
protein (321aa)
putative anaerobic sulfite reductase, A subunit id=5048728 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
FAD and NAD-binding oxidoreductase
rifcsplowo2_01_scaffold_11574_5

Not on your lists

4901..5698
-----------------
DNA (798bp)
protein (266aa)
oxidoreductase FAD/NAD(P)-binding domain-containing protein id=5048727 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
oxidoreductase FAD/NAD(P)-binding domain protein
rifcsplowo2_01_scaffold_11574_6

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5691..6464
-----------------
DNA (774bp)
protein (258aa)
sulfhydrogenase subunit delta id=5048726 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hydrogenase
rifcsplowo2_01_scaffold_11574_7
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

6442..7716
-----------------
DNA (1275bp)
protein (425aa)
nickel-dependent hydrogenase id=5048725 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
nickel-dependent hydrogenase
rifcsplowo2_01_scaffold_11574_8
unknown

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7713..7811
-----------------
DNA (99bp)
protein (33aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11574_9
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

7808..8167
-----------------
DNA (360bp)
protein (120aa)
hypothetical protein
seg id=5240633 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_11574_10
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

8146..9030
-----------------
DNA (885bp)
protein (295aa)
hypothetical protein id=5048722 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_11574_11
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

9027..9731
-----------------
DNA (705bp)
protein (235aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1CAF1_9ZZZZ
hypothetical protein
rifcsplowo2_01_scaffold_11574_12
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(9717..9935)
-----------------
DNA (219bp)
protein (73aa)
id=5048720 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_11574_13
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(9935..10255)
-----------------
DNA (321bp)
protein (107aa)
id=5048719 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_11574_14

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comp(10255..11259)
-----------------
DNA (1005bp)
protein (335aa)
Uncharacterized protein id=5800423 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
rifcsplowo2_01_scaffold_11574_15

Not on your lists

comp(11256..12575)
-----------------
DNA (1320bp)
protein (440aa)
fumarate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] id=5045869 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
adenylosuccinate lyase
rifcsplowo2_01_scaffold_11574_16
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(12609..13385)
-----------------
DNA (777bp)
protein (259aa)
Inositol-1-monophosphatase id=3833419 bin=GWF2_OP3_43_52 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
inositol monophosphatase
rifcsplowo2_01_scaffold_11574_17
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13382..14317)
-----------------
DNA (936bp)
protein (312aa)
phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JFZ6_ANAD2
rifcsplowo2_01_scaffold_11574_18
RBG_19FT_COMBO_OP11_43_10_curated, Microgenomates, Bacteria

Not on your lists

comp(14329..14775)
-----------------
DNA (447bp)
protein (149aa)
NUDIX family hydrolase id=4759203 bin=PER_GWC2_41_7 species=Pseudomonas sp. M47T1 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
NUDIX hydrolase
rifcsplowo2_01_scaffold_11574_19
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14772..15587)
-----------------
DNA (816bp)
protein (272aa)
purE; putative phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] id=5045875 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21 5.4.99.18)
rifcsplowo2_01_scaffold_11574_20
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

16093..17064
-----------------
DNA (972bp)
protein (324aa)
AsnC/Lrp family transcriptional regulator id=24450671 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
rifcsplowo2_01_scaffold_11574_21
unknown

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comp(17216..17512)
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11574_22
GWA2_OD1_44_12, Parcubacteria, Bacteria

Not on your lists

17565..18884
-----------------
DNA (1320bp)
protein (440aa)
Glutamate-cysteine ligase family 2(GCS2)
Uncharacterized protein id=5049175 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_11574_23
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18876..20591)
-----------------
DNA (1716bp)
protein (572aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthetase n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B51BBE
rifcsplowo2_01_scaffold_11574_24
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

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comp(20588..23758)
-----------------
DNA (3171bp)
protein (1057aa)
Carbamoyl-phosphate synthase, large subunit id=2471704 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes rbh
carB; carbamoylphosphate synthase large subunit
rifcsplowo2_01_scaffold_11574_25
R_OD1_Kaiserbacteria_54_11b, Kaiserbacteria, Parcubacteria, Bacteria

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comp(23755..24846)
-----------------
DNA (1092bp)
protein (364aa)
carA; Carbamoylphosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] id=5046264 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
carbamoyl phosphate synthase small subunit
Displaying 25 items

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