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rifcsplowo2_01_scaffold_4283

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_4283_1
RIFOXYB2_FULL_Gammaproteobacteria_38_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(116..295)
-----------------
DNA (180bp)
protein (60aa)
transposase Tax=RIFOXYB2_FULL_Gammaproteobacteria_38_6_curated
rifcsplowo2_01_scaffold_4283_2

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comp(592..1317)
-----------------
DNA (726bp)
protein (242aa)
Putative transposase n=1 Tax=uncultured archaeon RepID=I3RKX3_9ARCH
Putative transposase {ECO:0000313|EMBL:AFK24983.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
DDE endonuclease
rifcsplowo2_01_scaffold_4283_3
RIFOXYB2_FULL_Gammaproteobacteria_38_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1350..2216)
-----------------
DNA (867bp)
protein (289aa)
Transposase (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZA44_9ZZZZ
transposase Tax=RIFOXYB2_FULL_Gammaproteobacteria_38_6_curated
istA; transposase
rifcsplowo2_01_scaffold_4283_4

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comp(2497..3126)
-----------------
DNA (630bp)
protein (210aa)
Marine sediment metagenome DNA, contig: S01H1_L05135 {ECO:0000313|EMBL:GAF76182.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
condensin subunit ScpA; K05896 segregation and condensation protein A id=5048743 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Chromosome segregation and condensation protein ScpA
rifcsplowo2_01_scaffold_4283_5
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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3216..5801
-----------------
DNA (2586bp)
protein (862aa)
aminopeptidase N (EC:3.4.11.2)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASY4_9ARCH
Peptidase M1 membrane alanine aminopeptidase {ECO:0000313|EMBL:CDI05752.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
rifcsplowo2_01_scaffold_4283_6

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comp(5964..6185)
-----------------
DNA (222bp)
protein (74aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00036900FC
Marine sediment metagenome DNA, contig: S01H1_L08996 {ECO:0000313|EMBL:GAF97646.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsplowo2_01_scaffold_4283_7
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

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comp(6182..6382)
-----------------
DNA (201bp)
protein (67aa)
Uncharacterized protein family UPF0150 n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AC27_THEID
hypothetical protein
Uncharacterized protein family UPF0150 {ECO:0000313|EMBL:AEH44582.1}; TaxID=667014 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;"
rifcsplowo2_01_scaffold_4283_8
unknown

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comp(7234..7467)
-----------------
DNA (234bp)
protein (78aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4283_9
unknown

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comp(8035..8748)
-----------------
DNA (714bp)
protein (238aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4283_10
unknown

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comp(8752..9105)
-----------------
DNA (354bp)
protein (118aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4283_11

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9210..10163
-----------------
DNA (954bp)
protein (318aa)
AsnC family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA id=5044008 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA {ECO:0000313|EMBL:KHO46851.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
rifcsplowo2_01_scaffold_4283_12

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comp(10160..10981)
-----------------
DNA (822bp)
protein (274aa)
Phosphate uptake regulator, PhoU id=5043747 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Phosphate uptake regulator, PhoU {ECO:0000313|EMBL:KHO47063.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
phosphate uptake regulator PhoU
rifcsplowo2_01_scaffold_4283_13
Pseudovibrio sp. JE062, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11154..12668
-----------------
DNA (1515bp)
protein (505aa)
Putative uncharacterized protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R088_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EEA96120.1}; TaxID=439495 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovi
hypothetical protein
rifcsplowo2_01_scaffold_4283_14
unknown

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12679..13404
-----------------
DNA (726bp)
protein (242aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4283_15
unknown

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13449..13865
-----------------
DNA (417bp)
protein (139aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4283_16
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13904..14158
-----------------
DNA (255bp)
protein (85aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G2V1_9BRAD
Membrane protein {ECO:0000313|EMBL:KJC46104.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP8
hypothetical protein
rifcsplowo2_01_scaffold_4283_17
CG_Woesearch_01, Woesearchaeota, Archaea

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14481..15152
-----------------
DNA (672bp)
protein (224aa)
Tax=CG_Woesearch_01
rifcsplowo2_01_scaffold_4283_18
CG_Woesearch_01, Woesearchaeota, Archaea

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15130..15396
-----------------
DNA (267bp)
protein (89aa)
Putative transcriptional regulator n=1 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0AAB6_CALLD
Putative uncharacterized protein Tax=CG_Woesearch_01
transcriptional regulator
rifcsplowo2_01_scaffold_4283_19
Emiliania huxleyi, Emiliania, Isochrysidales, Eukaryota

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15860..16816
-----------------
DNA (957bp)
protein (319aa)
Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1E1S9_EMIHU
Uncharacterized protein {ECO:0000313|EMBL:EOD20800.1, ECO:0000313|EnsemblProtists:EOD20800}; Flags: Fragment;; TaxID=280463 species="Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliani
pentapeptide repeat-containing protein
rifcsplowo2_01_scaffold_4283_20
unknown

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16902..17573
-----------------
DNA (672bp)
protein (224aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4283_21
unknown

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comp(19847..20347)
-----------------
DNA (501bp)
protein (167aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4283_22
unknown

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comp(24395..25144)
-----------------
DNA (750bp)
protein (250aa)

This feature has no annotations

Displaying 22 items

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