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rifcsplowo2_01_scaffold_772

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_772_1

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comp(3..185)
-----------------
DNA (183bp)
protein (61aa)
Putative uncharacterized protein PHS004 n=2 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O74087_PYRHO id=5103673 bin=GW2011_AR20_complete species=Pyrococcus horikoshii genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKL92850.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsplowo2_01_scaffold_772_2
unknown

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comp(1936..2166)
-----------------
DNA (231bp)
protein (77aa)

This feature has no annotations

rifcsplowo2_01_scaffold_772_3
unknown

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comp(3952..4164)
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

rifcsplowo2_01_scaffold_772_4
unknown

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comp(6022..6213)
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

rifcsplowo2_01_scaffold_772_5
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(6262..6954)
-----------------
DNA (693bp)
protein (231aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100) Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier protein) reductase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UVF9_9AQUI
rifcsplowo2_01_scaffold_772_6
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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7075..7290
-----------------
DNA (216bp)
protein (72aa)
Tax=RBG_13_Pacearchaeota_33_26_curated
rifcsplowo2_01_scaffold_772_7
unknown

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comp(7645..8016)
-----------------
DNA (372bp)
protein (124aa)

This feature has no annotations

rifcsplowo2_01_scaffold_772_8
unknown

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comp(8197..8562)
-----------------
DNA (366bp)
protein (122aa)

This feature has no annotations

rifcsplowo2_01_scaffold_772_9
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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8621..9085
-----------------
DNA (465bp)
protein (155aa)
DNA ligase D, 3'-phosphoesterase domain protein; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RBG_16_Pacearchaeota_35_8_curated
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8Q0C8_METMA
hypothetical protein
rifcsplowo2_01_scaffold_772_10
unknown

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comp(9091..9306)
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

rifcsplowo2_01_scaffold_772_11
unknown

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comp(9619..9963)
-----------------
DNA (345bp)
protein (115aa)

This feature has no annotations

rifcsplowo2_01_scaffold_772_12
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(10020..10949)
-----------------
DNA (930bp)
protein (310aa)
30S ribosomal protein S2 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS2_NANEQ id=5102942 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rps2P; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RBG_13_Pacearchaeota_33_26_curated
30S ribosomal protein S2
rifcsplowo2_01_scaffold_772_13
AR19, Pacearchaeaota, DPANN, Archaea

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comp(10982..12151)
-----------------
DNA (1170bp)
protein (390aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=AR19
eno; enolase, N-terminal domain / enolase, C-terminal TIM barrel domain multi-domain protein (EC:4.2.1.11)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E3B39
rifcsplowo2_01_scaffold_772_14
unknown

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comp(12397..12819)
-----------------
DNA (423bp)
protein (141aa)

This feature has no annotations

rifcsplowo2_01_scaffold_772_15
unknown

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comp(12827..13798)
-----------------
DNA (972bp)
protein (324aa)

This feature has no annotations

rifcsplowo2_01_scaffold_772_16
unknown

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comp(14084..14743)
-----------------
DNA (660bp)
protein (220aa)

This feature has no annotations

rifcsplowo2_01_scaffold_772_17
unknown

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comp(14781..14996)
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

rifcsplowo2_01_scaffold_772_18
unknown

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comp(15145..15612)
-----------------
DNA (468bp)
protein (156aa)

This feature has no annotations

rifcsplowo2_01_scaffold_772_19
CG_Pacearch_02, Pacearchaeota, Archaea

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comp(15594..16709)
-----------------
DNA (1116bp)
protein (372aa)
Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_772_20
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(16953..17330)
-----------------
DNA (378bp)
protein (126aa)
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] Tax=RBG_16_Pacearchaeota_35_8_curated
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] id=5045738 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_772_21
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(17602..18402)
-----------------
DNA (801bp)
protein (267aa)
Ribosomal RNA-processing protein RRP42 n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BIN3_9EURY id=5103846 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
exosome complex exonuclease 2; K12589 exosome complex component RRP42 Tax=RBG_13_Pacearchaeota_33_26_curated
Ribosomal RNA-processing protein RRP42
rifcsplowo2_01_scaffold_772_22
unknown

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comp(18399..18566)
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

rifcsplowo2_01_scaffold_772_23
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(18568..19287)
-----------------
DNA (720bp)
protein (240aa)
exosome complex exonuclease Rrp41 n=1 Tax=Thermococcus zilligii AN1 RepID=UPI000299EC77 id=5103845 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ribosomal RNA-processing protein RRP41/SKI6 Tax=RBG_16_Pacearchaeota_35_8_curated
exosome complex exonuclease Rrp41
rifcsplowo2_01_scaffold_772_24
unknown

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comp(19290..19514)
-----------------
DNA (225bp)
protein (75aa)

This feature has no annotations

rifcsplowo2_01_scaffold_772_25
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(19507..20196)
-----------------
DNA (690bp)
protein (230aa)
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 Tax=RBG_13_Pacearchaeota_33_26_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003632410
putative exosome complex RNA-binding protein 1
rifcsplowo2_01_scaffold_772_26

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comp(20199..20873)
-----------------
DNA (675bp)
protein (225aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003829AF7
Marine sediment metagenome DNA, contig: S01H1_L00021 {ECO:0000313|EMBL:GAF77057.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Shwachman-Bodian-diamond syndrome protein
rifcsplowo2_01_scaffold_772_27

Not on your lists

comp(20943..21668)
-----------------
DNA (726bp)
protein (242aa)
Proteasome alpha subunit {ECO:0000313|EMBL:KHO55226.1}; EC=3.4.25.1 {ECO:0000313|EMBL:KHO55226.1};; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Proteasome subunit alpha n=3 Tax=Thermococcus RepID=PSA_THESM id=5103842 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Proteasome subunit alpha
rifcsplowo2_01_scaffold_772_28

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comp(21758..22081)
-----------------
DNA (324bp)
protein (108aa)
Marine sediment metagenome DNA, contig: S06H3_S04456 {ECO:0000313|EMBL:GAI25822.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_01_scaffold_772_29

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comp(22078..22389)
-----------------
DNA (312bp)
protein (104aa)
Lycopene cyclase n=1 Tax=Formosa sp. AK20 RepID=M7NCV2_9FLAO id=5103876 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Lycopene cyclase
Lycopene cyclase {ECO:0000313|EMBL:AJF63154.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_772_30

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22610..23959
-----------------
DNA (1350bp)
protein (450aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820EA3
Uncharacterized protein {ECO:0000313|EMBL:KHO55233.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
RNA-metabolising metallo-beta-lactamase
Displaying items 1-30 of 93 in total

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