ggKbase home page

rifcsplowo2_01_scaffold_784

Search features with annotation key words

Displaying items 1-30 of 165 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_784_1
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(1..117)
-----------------
DNA (117bp)
protein (39aa)
type II R-M system restriction endonuclease n=1 Tax=Marinimicrobia RepID=UPI00039E4BD3
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein
rifcsplowo2_01_scaffold_784_2
unknown

Not on your lists

comp(200..469)
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

rifcsplowo2_01_scaffold_784_3
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(646..1458)
-----------------
DNA (813bp)
protein (271aa)
Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_784_4

Not on your lists

comp(1519..2523)
-----------------
DNA (1005bp)
protein (335aa)
Uncharacterized protein id=5800423 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61754.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
D-isomer specific 2-hydroxyacid dehydrogenase
rifcsplowo2_01_scaffold_784_5
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

2759..4333
-----------------
DNA (1575bp)
protein (525aa)
L-lactate transport n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7TF89_9DELT rbh
lldP_[C]; L-lactate permease Tax=CG_Pacearch_05
lactate permease
rifcsplowo2_01_scaffold_784_6
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(4417..5568)
-----------------
DNA (1152bp)
protein (384aa)
saccharopine dehydrogenase Tax=RBG_13_Pacearchaeota_33_26_curated
saccharopine dehydrogenase id=5050390 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
saccharopine dehydrogenase
rifcsplowo2_01_scaffold_784_7
R_Peregrinibacteria_48_14, Peregrinibacteria, Bacteria

Not on your lists

comp(5570..6808)
-----------------
DNA (1239bp)
protein (413aa)
Tax=RIFCSPLOWO2_02_FULL_Peregrinibacteria_48_14_curated
rifcsplowo2_01_scaffold_784_8
R_OP11_Curtissbacteria_41_11, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(6817..7395)
-----------------
DNA (579bp)
protein (193aa)
NADPH-dependent FMN reductase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A813_THEAQ
NADPH-dependent FMN reductase Tax=RIFCSPHIGHO2_01_FULL_OP11_Curtissbacteria_41_11_curated
hypothetical protein
rifcsplowo2_01_scaffold_784_9
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(7481..7963)
-----------------
DNA (483bp)
protein (161aa)
peptide methionine sulfoxide reductase MsrA (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] Tax=CG_Pacearch_06
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E9W5_METEZ
rifcsplowo2_01_scaffold_784_10
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

8349..8525
-----------------
DNA (177bp)
protein (59aa)
Tax=RBG_13_Pacearchaeota_33_26_curated
rifcsplowo2_01_scaffold_784_11
GWE2_OD1_45_35, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8651..9595)
-----------------
DNA (945bp)
protein (315aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU07218.1}; TaxID=1618993 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWE2_45_35.;"
rifcsplowo2_01_scaffold_784_12

Not on your lists

comp(9599..10099)
-----------------
DNA (501bp)
protein (167aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=77133 species="Bacteria; environmental samples
Dihydrofolate reductase n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BSS3_9EURY
dihydrofolate reductase
rifcsplowo2_01_scaffold_784_13
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(10102..10968)
-----------------
DNA (867bp)
protein (289aa)
hypothetical protein ; K13998 dihydrofolate reductase / thymidylate synthase [EC:1.5.1.3 2.1.1.45] Tax=RBG_16_Micrarchaeota_49_10_curated
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=uncultured bacterium RepID=K1Y5U0_9BACT
rifcsplowo2_01_scaffold_784_14

Not on your lists


comp(11227..11535)
-----------------
DNA (309bp)
protein (103aa)
30S ribosomal protein S10 n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HKT0_THES4
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
rps10p; 30S ribosomal protein S10P
rifcsplowo2_01_scaffold_784_15
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

11813..13525
-----------------
DNA (1713bp)
protein (571aa)
sodium/hydrogen exchanger Tax=CG_Pacearch_04
Transporter, CPA2 family id=5799540 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
sodium/hydrogen exchanger
rifcsplowo2_01_scaffold_784_16
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(13535..14176)
-----------------
DNA (642bp)
protein (214aa)
conserved membrane protein of unknown function
hypothetical protein Tax=RBG_16_Pacearchaeota_35_8_curated
hypothetical protein id=5046291 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_784_17
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

14392..15702
-----------------
DNA (1311bp)
protein (437aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=RBG_13_Pacearchaeota_33_26_curated
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Sulfurihydrogenibium sp. (strain YO3AOP1) RepID=SYS_SULSY
rifcsplowo2_01_scaffold_784_18
unknown

Not on your lists

15680..15982
-----------------
DNA (303bp)
protein (101aa)

This feature has no annotations

rifcsplowo2_01_scaffold_784_19
unknown

Not on your lists

16003..16245
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

rifcsplowo2_01_scaffold_784_20
unknown

Not on your lists

16259..16573
-----------------
DNA (315bp)
protein (105aa)

This feature has no annotations

rifcsplowo2_01_scaffold_784_21
unknown

Not on your lists

comp(16610..16987)
-----------------
DNA (378bp)
protein (126aa)

This feature has no annotations

rifcsplowo2_01_scaffold_784_22
unknown

Not on your lists

comp(16989..17138)
-----------------
DNA (150bp)
protein (50aa)

This feature has no annotations

rifcsplowo2_01_scaffold_784_23
unknown

Not on your lists

comp(17163..17306)
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

rifcsplowo2_01_scaffold_784_24
unknown

Not on your lists

17806..18051
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

rifcsplowo2_01_scaffold_784_25
unknown

Not on your lists

18085..18540
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

rifcsplowo2_01_scaffold_784_26
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

18926..19849
-----------------
DNA (924bp)
protein (308aa)
hypothetical protein Tax=AR13
rifcsplowo2_01_scaffold_784_27
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(20494..20751)
-----------------
DNA (258bp)
protein (86aa)
Tax=AR1
rifcsplowo2_01_scaffold_784_28
unknown

Not on your lists

comp(21083..21538)
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

rifcsplowo2_01_scaffold_784_29
unknown

Not on your lists

22056..22277
-----------------
DNA (222bp)
protein (74aa)

This feature has no annotations

rifcsplowo2_01_scaffold_784_30
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(22624..24009)
-----------------
DNA (1386bp)
protein (462aa)
hypothetical protein
hypothetical protein Tax=AR13
id=5102943 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Displaying items 1-30 of 165 in total

View Taxonomy