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rifcsplowo2_01_scaffold_28642

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_28642_1
unknown

Not on your lists

1..96
-----------------
DNA (96bp)
protein (32aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28642_2
unknown

Not on your lists

137..412
-----------------
DNA (276bp)
protein (92aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28642_3
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(415..2475)
-----------------
DNA (2061bp)
protein (687aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036A0D51
smc domain protein; K03546 exonuclease SbcC Tax=CG_Pacearch_06
SMC protein
rifcsplowo2_01_scaffold_28642_4
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(2472..3620)
-----------------
DNA (1149bp)
protein (383aa)
metallophosphoesterase Tax=CG_Pacearch_02
DNA double-strand break repair protein Mre11 id=5799870 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Metallophosphoesterase
rifcsplowo2_01_scaffold_28642_5
unknown

Not on your lists

comp(3663..3887)
-----------------
DNA (225bp)
protein (75aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28642_6
unknown

Not on your lists

comp(4167..4409)
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28642_7
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(4440..4973)
-----------------
DNA (534bp)
protein (178aa)
NEQ238 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MR9_NANEQ id=5103447 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative methylase Tax=CG_Pacearch_03
hypothetical protein
rifcsplowo2_01_scaffold_28642_8
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(4973..5404)
-----------------
DNA (432bp)
protein (144aa)
Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_28642_9
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(5401..6738)
-----------------
DNA (1338bp)
protein (446aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820EA3
RNA-metabolising metallo-beta-lactamase; K07021 Tax=CG_Pacearch_03
RNA-metabolising metallo-beta-lactamase
rifcsplowo2_01_scaffold_28642_10
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

7044..7865
-----------------
DNA (822bp)
protein (274aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003704509
htrA; DO serine protease Tax=CG_Pacearch_06
protease Do
rifcsplowo2_01_scaffold_28642_11
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

7916..8185
-----------------
DNA (270bp)
protein (90aa)
Marine sediment metagenome DNA, contig: S06H3_S04456 Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_28642_12
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

8236..9105
-----------------
DNA (870bp)
protein (290aa)
mechanosensitive ion channel protein MscS Tax=CG_Woesearch_01
MscS mechanosensitive ion channel
MscS mechanosensitive ion channel id=5241659 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_28642_13
unknown

Not on your lists

9137..9475
-----------------
DNA (339bp)
protein (113aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28642_14
unknown

Not on your lists

9548..9886
-----------------
DNA (339bp)
protein (113aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28642_15
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

10098..10823
-----------------
DNA (726bp)
protein (242aa)
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=CG_Pacearch_06
Proteasome subunit alpha
Proteasome subunit alpha id=5800797 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_28642_16
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


10826..11308
-----------------
DNA (483bp)
protein (161aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003829AF7
RNA-associated protein; K14574 ribosome maturation protein SDO1 Tax=CG_Pacearch_02
putative RNA-associated protein
rifcsplowo2_01_scaffold_28642_17
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

11301..11453
-----------------
DNA (153bp)
protein (51aa)
Shwachman-Bodian-Diamond syndrome protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHZ9_9EURY
hypothetical protein; K14574 ribosome maturation protein SDO1 Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_28642_18

Not on your lists

11519..11818
-----------------
DNA (300bp)
protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN19846.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsplowo2_01_scaffold_28642_19
unknown

Not on your lists

11923..12204
-----------------
DNA (282bp)
protein (94aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28642_20
RIFOXYB2_FULL_Peregrinibacteria_32_7_curated, Peregrinibacteria, Bacteria

Not on your lists

12432..13154
-----------------
DNA (723bp)
protein (241aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=halophilic archaeon DL31 RepID=G2MKA0_9ARCH
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E Tax=RIFOXYB2_FULL_Peregrinibacteria_32_7_curated
HAD-superfamily hydrolase
rifcsplowo2_01_scaffold_28642_21
unknown

Not on your lists

comp(13151..13861)
-----------------
DNA (711bp)
protein (237aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28642_22
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(14054..14332)
-----------------
DNA (279bp)
protein (93aa)
Putative toxin RelE4 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RELE4_METJA id=5103891 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Pacearch_02
hypothetical protein
rifcsplowo2_01_scaffold_28642_23
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(14336..14596)
-----------------
DNA (261bp)
protein (87aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003680118
hypothetical protein Tax=CG_Pacearch_02
hypothetical protein
rifcsplowo2_01_scaffold_28642_24

Not on your lists

14708..15187
-----------------
DNA (480bp)
protein (160aa)
Marine sediment metagenome DNA, contig: S01H1_S34482 {ECO:0000313|EMBL:GAG30967.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsplowo2_01_scaffold_28642_25
unknown

Not on your lists

15420..15707
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28642_26
unknown

Not on your lists

15761..16483
-----------------
DNA (723bp)
protein (241aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28642_27
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(16674..17468)
-----------------
DNA (795bp)
protein (265aa)
Putative transposase n=1 Tax=uncultured archaeon RepID=D1JHE4_9ARCH
Transposase, IS4 family protein/SWIM domain fusion Tax=CG_Pacearch_06
hypothetical protein
rifcsplowo2_01_scaffold_28642_28
unknown

Not on your lists

17571..17789
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28642_29
unknown

Not on your lists

17786..17986
-----------------
DNA (201bp)
protein (67aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28642_30
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(18600..18995)
-----------------
DNA (396bp)
protein (132aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV67_9ARCH
twitching motility protein PilT; K07062 Tax=RBG_13_Pacearchaeota_36_9_curated
putative nucleic acid-binding protein
Displaying 30 items

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