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rifcsplowo2_01_scaffold_24186

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_24186_1
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(3..98)
-----------------
DNA (96bp)
protein (32aa)
transposon-encoded protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_24186_2
CG_Pacearch_02, Pacearchaeota, Archaea

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241..1014
-----------------
DNA (774bp)
protein (258aa)
hypothetical protein Tax=CG_Pacearch_02
hypothetical protein id=5041796 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_24186_3
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


comp(1146..2276)
-----------------
DNA (1131bp)
protein (377aa)
tRNA CCA-pyrophosphorylase; K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] Tax=CG_Pacearch_02
tRNA nucleotidyltransferase (CCA-adding enzyme) id=5799810 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA nucleotidyltransferase CCA-adding enzyme
rifcsplowo2_01_scaffold_24186_4
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

2348..2689
-----------------
DNA (342bp)
protein (114aa)
id=5044649 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR19
rifcsplowo2_01_scaffold_24186_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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2676..2897
-----------------
DNA (222bp)
protein (74aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_24186_6
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(2996..3376)
-----------------
DNA (381bp)
protein (127aa)
Zn-ribbon containing protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEK5_METFS id=5103012 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Zn-ribbon containing protein
hypothetical protein; K07163 Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_24186_7
Paenibacillus pini, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3448..4251)
-----------------
DNA (804bp)
protein (268aa)
Uncharacterized protein {ECO:0000313|EMBL:GAF07693.1}; TaxID=1236976 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus pini JCM 16418.;"
Putative uncharacterized protein id=2984146 bin=GWC1_Spirochaetes_27_15 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
hypothetical protein
rifcsplowo2_01_scaffold_24186_8
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(4369..4767)
-----------------
DNA (399bp)
protein (133aa)
Uncharacterized protein n=2 Tax=Methanothermobacter RepID=D9PV24_METTM id=5103011 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_24186_9
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(4805..5431)
-----------------
DNA (627bp)
protein (209aa)
small GTP-binding protein; K06883 Tax=CG_Pacearch_06
small GTP-binding protein; K06883 id=5045267 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Small GTP-binding protein
rifcsplowo2_01_scaffold_24186_10
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(5434..8208)
-----------------
DNA (2775bp)
protein (925aa)
Marine sediment metagenome DNA, contig: S01H1_S33754 Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_24186_11
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(8189..10525)
-----------------
DNA (2337bp)
protein (779aa)
id=5044977 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_24186_12
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(10588..12009)
-----------------
DNA (1422bp)
protein (474aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=CG_Pacearch_06
tRNA-splicing ligase RtcB id=5800748 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_24186_13
unknown

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comp(12011..12520)
-----------------
DNA (510bp)
protein (170aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24186_14
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(12784..13194)
-----------------
DNA (411bp)
protein (137aa)
Protein archease n=2 Tax=Sulfolobus islandicus RepID=ARCH_SULIL
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein
rifcsplowo2_01_scaffold_24186_15
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(13196..13324)
-----------------
DNA (129bp)
protein (43aa)
hypothetical protein n=1 Tax=Psychroflexus tropicus RepID=UPI00035DF631
integrase family protein Tax=CG_Pacearch_01
putative integrase/recombinase
Displaying 15 items

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