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rifcsplowo2_01_scaffold_15135

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_15135_1
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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103..1818
-----------------
DNA (1716bp)
protein (572aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RT09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16071.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL
hypothetical protein
rifcsplowo2_01_scaffold_15135_2

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1858..2868
-----------------
DNA (1011bp)
protein (337aa)
endoglucanase (EC:3.2.1.4)
cellulase (EC:3.2.1.4); K01179 endoglucanase [EC:3.2.1.4] id=5241610 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Endoglucanase {ECO:0000313|EMBL:AJF60601.1}; EC=3.2.1.4 {ECO:0000313|EMBL:AJF60601.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsplowo2_01_scaffold_15135_3
CG_Pacearch_06, Pacearchaeota, Archaea

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2865..3707
-----------------
DNA (843bp)
protein (281aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000361762F
hypothetical protein Tax=CG_Pacearch_06
membrane protein
rifcsplowo2_01_scaffold_15135_4
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(4033..5334)
-----------------
DNA (1302bp)
protein (434aa)
asparaginyl-tRNA synthetase; K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] Tax=CG_Pacearch_04
Asparaginyl-tRNA synthetase n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGF4_ACIB4 id=5103855 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Asparaginyl-tRNA synthetase
rifcsplowo2_01_scaffold_15135_5
CG_Woesearch_02, Woesearchaeota, Archaea

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5369..6454
-----------------
DNA (1086bp)
protein (362aa)
tRNA-guanine transglycosylase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=CG_Woesearch_02
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] id=5043744 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
rifcsplowo2_01_scaffold_15135_6
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6428..7381)
-----------------
DNA (954bp)
protein (318aa)
Potassium-dependent sodium-calcium exchanger n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12YQ8_METBU
K+-dependent Na+/Ca+ exchanger related-protein
Potassium-dependent sodium-calcium exchanger {ECO:0000313|EMBL:ABE51418.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" so
rifcsplowo2_01_scaffold_15135_7
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(7378..8373)
-----------------
DNA (996bp)
protein (332aa)
alias=gwa2_scaffold_521_40 id=18248230 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alias=gwa2_scaffold_521_40 Tax=AR5
rifcsplowo2_01_scaffold_15135_8
unknown

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comp(8375..8506)
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

rifcsplowo2_01_scaffold_15135_9

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comp(8552..9847)
-----------------
DNA (1296bp)
protein (432aa)
BSCG--tRNA--synthetase--aspartyl
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] id=5042263 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KHO46761.1}; EC=6.1.1.12 {ECO:0000313|EMBL:KHO46761.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
aspartyl-tRNA synthetase (EC:6.1.1.12)
rifcsplowo2_01_scaffold_15135_10
Xenorhabdus bovienii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9901..10830
-----------------
DNA (930bp)
protein (310aa)
Uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=N9SZY5_KLEPN
Uncharacterized protein {ECO:0000313|EMBL:CDH23570.1}; TaxID=1398204 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus b
hypothetical protein
Displaying 10 items

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