ggKbase home page

rifcsplowo2_01_scaffold_2834

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_2834_1
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(3..713)
-----------------
DNA (711bp)
protein (237aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003704509
protease Tax=CG_Pacearch_05
2-alkenal reductase
rifcsplowo2_01_scaffold_2834_2
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(716..1174)
-----------------
DNA (459bp)
protein (153aa)
protein-disulfide isomerase-like protein
DSBA oxidoreductase id=5044103 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DSBA oxidoreductase Tax=AR18
rifcsplowo2_01_scaffold_2834_3
unknown

Not on your lists

1253..1399
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2834_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

1450..2013
-----------------
DNA (564bp)
protein (188aa)
hypothetical protein; K07043 Tax=RBG_13_Pacearchaeota_36_9_curated
Putative uncharacterized protein id=4260243 bin=GWF2_OP9_related_35_9 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
hypothetical protein
rifcsplowo2_01_scaffold_2834_5
unknown

Not on your lists

comp(2112..2255)
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2834_6
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

2584..3498
-----------------
DNA (915bp)
protein (305aa)
tRNA-dihydrouridine synthase n=1 Tax=Clostridium sp. CAG:628 RepID=R7MEK5_9CLOT
tRNA-U20-dihydrouridine synthase Tax=CG_Pacearch_05
nifR3 family TIM-barrel protein
rifcsplowo2_01_scaffold_2834_7
unknown

Not on your lists

3513..3905
-----------------
DNA (393bp)
protein (131aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2834_8
unknown

Not on your lists

3936..4592
-----------------
DNA (657bp)
protein (219aa)
Ribonuclease n=2 Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWV0_9EURY id=5103472 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribonuclease n=2 Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWV0_9EURY Tax=AR20
Ribonuclease
rifcsplowo2_01_scaffold_2834_9
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4783..6033
-----------------
DNA (1251bp)
protein (417aa)
Dead box RNA helicase n=2 Tax=Methanococcoides burtonii RepID=Q12UP5_METBU
Cold-shock DEAD-box protein A {ECO:0000313|EMBL:AKB84226.1}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanoc
DEAD/DEAH box helicase-like protein
rifcsplowo2_01_scaffold_2834_10
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6455..6844
-----------------
DNA (390bp)
protein (130aa)
DoxX family protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AW29_9EURY
DoxX family protein {ECO:0000313|EMBL:ELZ02173.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
DoxX family protein
rifcsplowo2_01_scaffold_2834_11
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

6868..7881
-----------------
DNA (1014bp)
protein (338aa)
Putative uncharacterized protein n=1 Tax=Dictyostelium purpureum RepID=F0ZLB4_DICPU
hypothetical protein Tax=CG_Pacearch_06
oxidoreductase
rifcsplowo2_01_scaffold_2834_12

Not on your lists

7906..11223
-----------------
DNA (3318bp)
protein (1106aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003780A4C
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
chromosome segregation protein SMC
rifcsplowo2_01_scaffold_2834_13
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

comp(11147..11404)
-----------------
DNA (258bp)
protein (86aa)
Helicase n=1 Tax=Clostridium sp. CAG:242 RepID=R6CXU3_9CLOT
hypothetical protein Tax=RBG_13_Bathyarchaeota_52_12_curated
helicase
rifcsplowo2_01_scaffold_2834_14
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(11409..11891)
-----------------
DNA (483bp)
protein (161aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00035C462D
hypothetical protein Tax=CG_Pacearch_02
hypothetical protein
rifcsplowo2_01_scaffold_2834_15
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(11884..12474)
-----------------
DNA (591bp)
protein (197aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI000365532B
Nucleotidyl transferase domain Tax=CG_Pacearch_02
Nucleotidyl transferase domain
rifcsplowo2_01_scaffold_2834_16
Firmicutes bacterium CAG:884, Firmicutes, Bacteria

Not on your lists

comp(12541..12765)
-----------------
DNA (225bp)
protein (75aa)
Phage shock protein C PspC n=1 Tax=Firmicutes bacterium CAG:884 RepID=R5MXH5_9FIRM
Phage shock protein C PspC {ECO:0000313|EMBL:CCY94394.1}; TaxID=1262990 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:884.;"
phage shock protein C, PspC
rifcsplowo2_01_scaffold_2834_17

Not on your lists

comp(12796..14979)
-----------------
DNA (2184bp)
protein (728aa)
Putative uncharacterized protein n=1 Tax=uncultured euryarchaeote Alv-FOS5 RepID=Q3SBB2_9EURY id=5103476 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62757.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_2834_18
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15075..16322)
-----------------
DNA (1248bp)
protein (416aa)
hypothetical protein
id=5103477 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_2834_19
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(16406..18601)
-----------------
DNA (2196bp)
protein (732aa)
RHS repeat-associated core domain protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EM26_9CYAN id=5103478 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RHS repeat-associated core protein
Uncharacterized protein {ECO:0000313|EMBL:AEX85077.1}; Flags: Precursor;; TaxID=443254 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain
rifcsplowo2_01_scaffold_2834_20
unknown

Not on your lists

comp(18604..19860)
-----------------
DNA (1257bp)
protein (419aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2834_21
unknown

Not on your lists

comp(19963..20373)
-----------------
DNA (411bp)
protein (137aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2834_22
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(20587..21279)
-----------------
DNA (693bp)
protein (231aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374EF8F
hypothetical protein
seg Tax=AR15
rifcsplowo2_01_scaffold_2834_23

Not on your lists

comp(21272..21844)
-----------------
DNA (573bp)
protein (191aa)
hypothetical protein
id=5045767 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54434.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsplowo2_01_scaffold_2834_24
unknown

Not on your lists

comp(21893..22822)
-----------------
DNA (930bp)
protein (310aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2834_25
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

22870..23280
-----------------
DNA (411bp)
protein (137aa)
archease Tax=RBG_13_Pacearchaeota_36_9_curated
Protein archease id=5800690 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
archease family protein
rifcsplowo2_01_scaffold_2834_26

Not on your lists

23282..24700
-----------------
DNA (1419bp)
protein (473aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN53900.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=8267058 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
rifcsplowo2_01_scaffold_2834_27
unknown

Not on your lists

24801..25208
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2834_28
unknown

Not on your lists

25257..25883
-----------------
DNA (627bp)
protein (209aa)
Small GTP-binding protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGX3_ARCPA id=5103010 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Small GTP-binding protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGX3_ARCPA Tax=AR20
Small GTP-binding protein
rifcsplowo2_01_scaffold_2834_29
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

25880..26251
-----------------
DNA (372bp)
protein (124aa)
Uncharacterized protein n=2 Tax=Methanothermobacter RepID=D9PV24_METTM id=5103011 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein Tax=CG_Woesearch_02
hypothetical protein
rifcsplowo2_01_scaffold_2834_30
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(26253..26882)
-----------------
DNA (630bp)
protein (210aa)
Mgtc/sapb transporter n=2 Tax=Elizabethkingia meningoseptica RepID=R9CJ69_ELIME
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein Tax=AR13
putative Mg(2+) transport ATPase
Displaying items 1-30 of 32 in total

View Taxonomy