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rifcsplowo2_01_scaffold_10346

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_10346_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(24..923)
-----------------
DNA (900bp)
protein (300aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000371A96B
site-specific recombinase XerD Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
rifcsplowo2_01_scaffold_10346_2
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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992..1441
-----------------
DNA (450bp)
protein (150aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E0D8C
putative PAS sensor signal transduction histidine kinase
Putative PAS sensor signal transduction histidine kinase {ECO:0000313|EMBL:AFD00038.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.
rifcsplowo2_01_scaffold_10346_3
Pyrolobus fumarii, Pyrolobus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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1484..3790
-----------------
DNA (2307bp)
protein (769aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
Phosphoenolpyruvate synthase n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EDW3_PYRF1
phosphoenolpyruvate synthase
rifcsplowo2_01_scaffold_10346_4
unknown

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comp(3787..4239)
-----------------
DNA (453bp)
protein (151aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10346_5
unknown

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4375..5058
-----------------
DNA (684bp)
protein (228aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10346_6
unknown

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comp(5073..5843)
-----------------
DNA (771bp)
protein (257aa)
DNA polymerase beta domain protein region n=2 Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWJ4_9EURY id=5103718 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase beta domain protein region n=2 Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWJ4_9EURY Tax=AR20
DNA polymerase beta protein
rifcsplowo2_01_scaffold_10346_7

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comp(5884..7791)
-----------------
DNA (1908bp)
protein (636aa)
AP endonuclease family enzyme n=1 Tax=nanoarchaeote Nst1 RepID=R1G9P0_9ARCH id=5103721 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
AP endonuclease family enzyme
AP endonuclease family enzyme {ECO:0000313|EMBL:AJF62999.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_10346_8
unknown

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comp(7794..8405)
-----------------
DNA (612bp)
protein (204aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10346_9
unknown

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comp(8399..9883)
-----------------
DNA (1485bp)
protein (495aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GV01_9EURY id=5103723 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GV01_9EURY Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_10346_10
unknown

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9921..10271
-----------------
DNA (351bp)
protein (117aa)
Lipoprotein signal peptidase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K946_HALHC id=5103724 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Lipoprotein signal peptidase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K946_HALHC Tax=AR20
Lipoprotein signal peptidase
rifcsplowo2_01_scaffold_10346_11

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10412..11596
-----------------
DNA (1185bp)
protein (395aa)
Putative GTPase, probable translation factor n=1 Tax=nanoarchaeote Nst1 RepID=R1E424_9ARCH id=5103591 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62872.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_10346_12
unknown

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11629..12324
-----------------
DNA (696bp)
protein (232aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAK5_METMS id=5103592 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAK5_METMS Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_10346_13
GWC1_OD1_38_17, Parcubacteria, Bacteria

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12334..12753
-----------------
DNA (420bp)
protein (140aa)
Putative uncharacterized protein id=2824575 bin=GWC1_OD1_38_17 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Uncharacterized protein {ECO:0000313|EMBL:KKQ58956.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
vitamin K epoxide reductase complex subunit 1 precursor
rifcsplowo2_01_scaffold_10346_14
unknown

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comp(12766..12921)
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10346_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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13270..13503
-----------------
DNA (234bp)
protein (78aa)
DNA methyltransferase n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI00035F4CFB
type I restriction-modification system methyltransferase subunit Tax=RBG_13_Bathyarchaeota_38_9_curated
N-6 DNA methylase
Displaying 15 items

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