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rifcsplowo2_01_scaffold_10447

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_10447_1
unknown

Not on your lists

comp(52..486)
-----------------
DNA (435bp)
protein (145aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10447_2
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(490..1263)
-----------------
DNA (774bp)
protein (258aa)
NEQ098 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MK1_NANEQ id=5103643 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=AR17
hypothetical protein
rifcsplowo2_01_scaffold_10447_3
unknown

Not on your lists

1395..1640
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10447_4

Not on your lists

comp(1642..3252)
-----------------
DNA (1611bp)
protein (537aa)
Thermosome, chaperonin Cpn60/TCP-1 n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MRK6_9EURY id=5103700 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Thermosome, chaperonin Cpn60/TCP-1
Thermosome, chaperonin Cpn60/TCP-1 {ECO:0000313|EMBL:AJF62978.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_10447_5
unknown

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comp(3296..3460)
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10447_6
unknown

Not on your lists

comp(3556..3687)
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10447_7

Not on your lists

3775..4713
-----------------
DNA (939bp)
protein (313aa)
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL id=5103746 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SpoVT/AbrB protein
SpoVT/AbrB protein {ECO:0000313|EMBL:AJF63024.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_10447_8

Not on your lists

4720..6435
-----------------
DNA (1716bp)
protein (572aa)
Probable translation initiation factor IF-2 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY66_METFV id=5103748 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative translation initiation factor IF-2
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_10447_9
unknown

Not on your lists


6436..6840
-----------------
DNA (405bp)
protein (135aa)
ASCG--Ribosomal--protein--S6e
30S ribosomal protein S6e n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZQ0_METCG id=5103749 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S6e n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZQ0_METCG Tax=AR20
30S ribosomal protein S6e
rifcsplowo2_01_scaffold_10447_10
unknown

Not on your lists


7227..8414
-----------------
DNA (1188bp)
protein (396aa)
ASCG--Translation--initiation--factor--IF-2--subunit--gamma
Translation initiation factor 2 subunit gamma n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQJ1_METIM id=5103750 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Translation initiation factor 2 subunit gamma n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQJ1_METIM Tax=AR20
Translation initiation factor 2 subunit gamma
rifcsplowo2_01_scaffold_10447_11
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

8580..8873
-----------------
DNA (294bp)
protein (98aa)
hypothetical protein
id=5103695 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_10447_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


8907..9203
-----------------
DNA (297bp)
protein (99aa)
ASCG--Ribosomal--protein--L21e
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003600E98
50S ribosomal protein L21; K02889 large subunit ribosomal protein L21e Tax=CG_Woesearch_02
50S ribosomal protein L21e
rifcsplowo2_01_scaffold_10447_13

Not on your lists

9191..9529
-----------------
DNA (339bp)
protein (113aa)
Conserved protein n=2 Tax=Methanothermobacter RepID=O27379_METTH id=5103693 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62971.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_10447_14

Not on your lists

9550..10113
-----------------
DNA (564bp)
protein (188aa)
DNA-binding protein n=3 Tax=Pyrococcus RepID=Q8TZW3_PYRFU id=5103692 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AJF62970.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_10447_15
unknown

Not on your lists


10177..10659
-----------------
DNA (483bp)
protein (161aa)
ASCG--Ribosomal--protein--S13
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ id=5103690 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ Tax=AR20
30S ribosomal protein S13
rifcsplowo2_01_scaffold_10447_16
unknown

Not on your lists


10662..11279
-----------------
DNA (618bp)
protein (206aa)
30S ribosomal protein S4 n=2 Tax=Methanotorris RepID=F6BD43_METIK id=5103689 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S4 n=2 Tax=Methanotorris RepID=F6BD43_METIK Tax=AR20
30S ribosomal protein S4
rifcsplowo2_01_scaffold_10447_17
unknown

Not on your lists


11257..11676
-----------------
DNA (420bp)
protein (140aa)
30S ribosomal protein S11 n=4 Tax=Desulfurococcales RepID=RS11_HYPBU id=5103688 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S11 n=4 Tax=Desulfurococcales RepID=RS11_HYPBU Tax=AR20
30S ribosomal protein S11
rifcsplowo2_01_scaffold_10447_18

Not on your lists

11633..12331
-----------------
DNA (699bp)
protein (233aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
DNA-directed RNA polymerase subunit D n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I735_METCZ id=5103687 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit D
rifcsplowo2_01_scaffold_10447_19
unknown

Not on your lists


12333..12698
-----------------
DNA (366bp)
protein (122aa)
ASCG--Ribosomal--protein--L18e
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037805E2
50S ribosomal protein L18e n=2 Tax=Staphylothermus RepID=A3DMQ7_STAMF Tax=AR20
50S ribosomal protein L18e
rifcsplowo2_01_scaffold_10447_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


12723..13142
-----------------
DNA (420bp)
protein (140aa)
ASCG--Ribosomal--protein--L13
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000361BC64
50S ribosomal protein L13 Tax=CG_Woesearch_02
50S Ribosomal protein L13A
rifcsplowo2_01_scaffold_10447_21
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


13136..13537
-----------------
DNA (402bp)
protein (134aa)
ASCG--Ribosomal--protein--S9
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RBG_13_Woesearchaeota_36_6_curated
50S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=5048340 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S9
rifcsplowo2_01_scaffold_10447_22
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists


13560..13736
-----------------
DNA (177bp)
protein (59aa)
ASCG--DNA-directed--RNA--polymerase--subunit--N
RNA polymerase, N/8 Kd subunits; K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] Tax=CG_Pacearch_04
DNA-directed RNA polymerase subunit N n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ id=5103677 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit N
rifcsplowo2_01_scaffold_10447_23

Not on your lists

13767..14177
-----------------
DNA (411bp)
protein (137aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQ03_9CHLR id=5103676 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62954.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_10447_24

Not on your lists

14548..14802
-----------------
DNA (255bp)
protein (85aa)
50S ribosomal protein L30e n=12 Tax=Sulfolobus RepID=RL30E_SULSO id=5103775 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L30e
50S ribosomal protein L30e {ECO:0000313|EMBL:AJF63053.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_10447_25
unknown

Not on your lists

14799..15203
-----------------
DNA (405bp)
protein (135aa)
Putative KH domain protein n=3 Tax=environmental samples RepID=B3T301_9ARCH id=5103769 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative KH domain protein n=3 Tax=environmental samples RepID=B3T301_9ARCH Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_10447_26

Not on your lists


15196..15633
-----------------
DNA (438bp)
protein (146aa)
30S ribosomal protein S12 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS12_METKA id=5103768 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|RuleBase:RU004490}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_10447_27
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


15630..16220
-----------------
DNA (591bp)
protein (197aa)
ASCG--Ribosomal--protein--S7
30S ribosomal protein S7 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS7_NANEQ id=5103767 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 Tax=AR17
30S ribosomal protein S7
rifcsplowo2_01_scaffold_10447_28
unknown

Not on your lists

16430..16525
-----------------
DNA (96bp)
protein (32aa)

This feature has no annotations

Displaying 28 items

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