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rifcsplowo2_01_scaffold_13607

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_13607_1

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comp(1..594)
-----------------
DNA (594bp)
protein (198aa)
UPI00019B05F4 related cluster n=1 Tax=unknown RepID=UPI00019B05F4 id=5103350 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62631.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_13607_2

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comp(591..1115)
-----------------
DNA (525bp)
protein (175aa)
ZPR1-like zinc finger protein n=2 Tax=Methanotorris RepID=F6BBD3_METIK id=5103036 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ZPR1-like protein zinc finger protein
ZPR1-like protein zinc finger protein {ECO:0000313|EMBL:AJF62317.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_13607_3

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comp(1146..1529)
-----------------
DNA (384bp)
protein (128aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0A9E6_9EURY id=5103035 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62316.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_13607_4
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1571..1810)
-----------------
DNA (240bp)
protein (80aa)
Uncharacterized protein conserved in archaea Tax=CG_Woesearch_02
hypothetical protein; K09721 hypothetical protein id=5044066 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein; K09721 hypothetical protein
rifcsplowo2_01_scaffold_13607_5

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comp(1807..2130)
-----------------
DNA (324bp)
protein (108aa)
Prefoldin subunit beta n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=PFDB_METKA id=5103033 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Prefoldin subunit beta
Prefoldin subunit beta {ECO:0000313|EMBL:AJF62314.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_13607_6

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comp(2266..2478)
-----------------
DNA (213bp)
protein (71aa)
50S ribosomal protein L37Ae n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHQ8_THEBM id=5103031 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L37Ae
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_13607_7
unknown

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comp(2787..3434)
-----------------
DNA (648bp)
protein (216aa)
50S ribosomal protein L11 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369B37C
LSU ribosomal protein L11P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXB4_METFV Tax=AR20
LSU ribosomal protein L11P
rifcsplowo2_01_scaffold_13607_8

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comp(3418..3876)
-----------------
DNA (459bp)
protein (153aa)
ASCG--Transcription--elongation--factor--Spt5
LSU ribosomal protein L24A (Rpl24A) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29713_ARCFU id=5103029 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
LSU ribosomal protein L24A Rpl24A
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_13607_9
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(3873..4055)
-----------------
DNA (183bp)
protein (61aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003829297
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins Tax=CG_Woesearch_02
Preprotein translocase subunit SecE
rifcsplowo2_01_scaffold_13607_10
unknown

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comp(4095..5201)
-----------------
DNA (1107bp)
protein (369aa)
Cell division protein FtsZ n=1 Tax=sediment metagenome RepID=D9PEV5_9ZZZZ id=5103027 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Cell division protein FtsZ n=1 Tax=sediment metagenome RepID=D9PEV5_9ZZZZ Tax=AR20
Cell division protein FtsZ
rifcsplowo2_01_scaffold_13607_11
unknown

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comp(5264..5890)
-----------------
DNA (627bp)
protein (209aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pyrococcus sp. ST04 RepID=I3RFB4_9EURY id=5103026 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pyrococcus sp. ST04 RepID=I3RFB4_9EURY Tax=AR20
Peptidyl-prolyl cis-trans isomerase
rifcsplowo2_01_scaffold_13607_12
CG_Pacearch_04, Pacearchaeota, Archaea

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5942..6277
-----------------
DNA (336bp)
protein (112aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037419FE
Uncharacterized protein Tax=CG_Pacearch_04
rifcsplowo2_01_scaffold_13607_13

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6316..6711
-----------------
DNA (396bp)
protein (132aa)
ASCG--Translation--initiation--factor--5A
Marine sediment metagenome DNA, contig: S01H1_S10434 {ECO:0000313|EMBL:GAG01596.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Translation initiation factor 5A id=5800376 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Translation initiation factor 5A
rifcsplowo2_01_scaffold_13607_14
unknown

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6871..8031
-----------------
DNA (1161bp)
protein (387aa)
Peptidase M50 n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFS7_9EURY id=5103023 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Peptidase M50 n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFS7_9EURY Tax=AR20
Peptidase M50
rifcsplowo2_01_scaffold_13607_15

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8033..8779
-----------------
DNA (747bp)
protein (249aa)
Hydrolase, TatD family n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYL3_METFV id=5103022 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Hydrolase, TatD family
Hydrolase, TatD family {ECO:0000313|EMBL:AJF62303.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_13607_16
unknown

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8882..8986
-----------------
DNA (105bp)
protein (35aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13607_17
unknown

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comp(9077..9232)
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13607_18
unknown

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comp(9174..9287)
-----------------
DNA (114bp)
protein (38aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13607_19
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(9506..10555)
-----------------
DNA (1050bp)
protein (350aa)
ORC complex protein Cdc6/Orc1 Tax=RBG_13_Woesearchaeota_36_6_curated
ORC1-type DNA replication protein id=5800648 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ORC1-type DNA replication protein
rifcsplowo2_01_scaffold_13607_20
AR20, Woesearchaeaota, DPANN, Archaea

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comp(10590..10946)
-----------------
DNA (357bp)
protein (119aa)
hypothetical protein
id=5103013 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_13607_21
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(11023..11703)
-----------------
DNA (681bp)
protein (227aa)
Putative transposase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IND8_NITGG id=5103518 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
transposase Tax=CG_Pacearch_06
hypothetical protein
rifcsplowo2_01_scaffold_13607_22
unknown

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comp(11739..11858)
-----------------
DNA (120bp)
protein (40aa)

This feature has no annotations

Displaying 22 items

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