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rifcsplowo2_01_scaffold_16856

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsplowo2_01_scaffold_16856_1
unknown

Not on your lists

83..343
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16856_2
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(513..3137)
-----------------
DNA (2625bp)
protein (875aa)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BEE1_METIK
P-type HAD superfamily ATPase
rifcsplowo2_01_scaffold_16856_3
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3255..3647)
-----------------
DNA (393bp)
protein (131aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037CC398
hypothetical protein
rifcsplowo2_01_scaffold_16856_4
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

3763..5598
-----------------
DNA (1836bp)
protein (612aa)
transketolase; K00615 transketolase [EC:2.2.1.1] id=5047351 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
transketolase
rifcsplowo2_01_scaffold_16856_5
unknown

Not on your lists

6087..6596
-----------------
DNA (510bp)
protein (170aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16856_6
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(6593..6949)
-----------------
DNA (357bp)
protein (119aa)
rifcsplowo2_01_scaffold_16856_7
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(6952..7257)
-----------------
DNA (306bp)
protein (102aa)
transmembrane_regions id=5042182 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
rifcsplowo2_01_scaffold_16856_8
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7275..7820)
-----------------
DNA (546bp)
protein (182aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4C070_METCG
ppiA; peptidyl-prolyl cis-trans isomerase
rifcsplowo2_01_scaffold_16856_9
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

7977..8432
-----------------
DNA (456bp)
protein (152aa)
hypothetical protein id=5049563 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
FHA domain
rifcsplowo2_01_scaffold_16856_10
unknown

Not on your lists

comp(8333..8560)
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16856_11
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(8612..8983)
-----------------
DNA (372bp)
protein (124aa)
glyoxalase/bleomycin resistance protein/dioxygenase; K06996 id=15189464 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
glyoxalase/bleomycin resistance protein/dioxygenase
rifcsplowo2_01_scaffold_16856_12
unknown

Not on your lists

9071..9724
-----------------
DNA (654bp)
protein (218aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16856_13
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9748..10137)
-----------------
DNA (390bp)
protein (130aa)
quinolinate synthase (EC:4.1.99.- 2.5.1.72)
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI0003699C18
rifcsplowo2_01_scaffold_16856_14
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10196..10786)
-----------------
DNA (591bp)
protein (197aa)
Quinolinate synthetase (EC:4.1.99.-)
Quinolinate synthetase n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FFB0_9BACT
rifcsplowo2_01_scaffold_16856_15
unknown

Not on your lists

comp(10837..11601)
-----------------
DNA (765bp)
protein (255aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16856_16
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

11893..12873
-----------------
DNA (981bp)
protein (327aa)
glyceraldehyde 3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Propionibacterium sp. KPL1844 RepID=U7JXM3_9ACTO
Displaying 16 items

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