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rifcsplowo2_01_scaffold_6332

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsplowo2_01_scaffold_6332_1
AR11, Woesearchaeaota, DPANN, Archaea

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279..854
-----------------
DNA (576bp)
protein (192aa)
Iron-sulfur cluster assembly accessory protein n=2 Tax=Waddlia chondrophila RepID=D6YW49_WADCW id=5103548 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Iron-sulfur cluster assembly accessory protein
rifcsplowo2_01_scaffold_6332_2

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1184..1540
-----------------
DNA (357bp)
protein (119aa)
thiol-specific antioxidant protein id=18248451 bin=AR5_curated_draft species=Leptospirillum sp. Group II '5-way CG' genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alkyl hydroperoxide reductase
rifcsplowo2_01_scaffold_6332_3
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

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1550..2029
-----------------
DNA (480bp)
protein (160aa)
Bacterioferritin id=1250209 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
bacterioferritin
rifcsplowo2_01_scaffold_6332_4
unknown

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comp(2038..2286)
-----------------
DNA (249bp)
protein (83aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6332_5
unknown

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comp(2304..2567)
-----------------
DNA (264bp)
protein (88aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6332_6
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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2834..4195
-----------------
DNA (1362bp)
protein (454aa)
Nicotinate phosphoribosyltransferase id=4387469 bin=GWC2_OP3_44_8 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52 rbh
nicotinate phosphoribosyltransferase
rifcsplowo2_01_scaffold_6332_7
R_WOR_2_45_21, WOR-2, Bacteria

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4221..4829
-----------------
DNA (609bp)
protein (203aa)
Isochorismatase hydrolase id=2010413 bin=GWB2_CP_45_9 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
isochorismatase hydrolase
rifcsplowo2_01_scaffold_6332_8
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4964..6340
-----------------
DNA (1377bp)
protein (459aa)
succinate-semialdehyde dehydrogenase (NAD(P)+) (EC:1.2.1.16)
NAD-dependent aldehyde dehydrogenase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZE0_METBU rbh
rifcsplowo2_01_scaffold_6332_9
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(6520..6897)
-----------------
DNA (378bp)
protein (126aa)
hypothetical protein
PIN domain-like id=5241235 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_6332_10
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(6891..7112)
-----------------
DNA (222bp)
protein (74aa)
rifcsplowo2_01_scaffold_6332_11
Schizophyllum commune, Schizophyllum, Agaricales, Agaricomycetidae, Basidiomycota, Fungi

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comp(7172..7486)
-----------------
DNA (315bp)
protein (105aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00035DE89A
Rieske (2Fe-2S) domain-containing protein
rifcsplowo2_01_scaffold_6332_12
R_Nitrospirae_40_19, Nitrospirae, Bacteria

Not on your lists

7667..8605
-----------------
DNA (939bp)
protein (313aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LRD2_HALO1
cobyrinic acid ac-diamide synthase
rifcsplowo2_01_scaffold_6332_13

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comp(8606..9052)
-----------------
DNA (447bp)
protein (149aa)
Protein archease n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYA7_METFV id=5103007 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protein archease
rifcsplowo2_01_scaffold_6332_14
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(9054..9800)
-----------------
DNA (747bp)
protein (249aa)
zinc/iron permease
zinc/iron permease id=5240831 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_6332_15
unknown

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comp(9913..11067)
-----------------
DNA (1155bp)
protein (385aa)
Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XHA1_9CHRO id=5103008 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsplowo2_01_scaffold_6332_16
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11182..11400)
-----------------
DNA (219bp)
protein (73aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] id=15192624 bin=GWC2_NOV_55_46 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hypothetical protein
rifcsplowo2_01_scaffold_6332_17

Not on your lists

11817..12230
-----------------
DNA (414bp)
protein (138aa)
single-stranded DNA-binding replication protein A, large (70 kD) subunit; K07466 replication factor A1 id=5048480 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
replication factor A1
rifcsplowo2_01_scaffold_6332_18

Not on your lists

comp(12485..14671)
-----------------
DNA (2187bp)
protein (729aa)
hypothetical protein id=5048098 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_6332_19

Not on your lists

comp(14761..17139)
-----------------
DNA (2379bp)
protein (793aa)
hypothetical protein id=5043756 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_6332_20

Not on your lists

comp(17328..17468)
-----------------
DNA (141bp)
protein (47aa)
Displaying 20 items

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