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rifcsplowo2_01_scaffold_2006

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsplowo2_01_scaffold_2006_1
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

271..2742
-----------------
DNA (2472bp)
protein (824aa)
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI00031E1BA7
cytochrome c biogenesis protein transmembrane region
rifcsplowo2_01_scaffold_2006_2
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

2803..3150
-----------------
DNA (348bp)
protein (116aa)
ArsR family transcriptional regulator id=5044094 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_2006_3
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

3292..3795
-----------------
DNA (504bp)
protein (168aa)
rifcsplowo2_01_scaffold_2006_4
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

3887..4078
-----------------
DNA (192bp)
protein (64aa)
hypothetical protein
rifcsplowo2_01_scaffold_2006_5
RBG_13_RIF_OD1_07_36_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

4369..5061
-----------------
DNA (693bp)
protein (231aa)
# 18907 # 19584 # -1 # ;gc_cont=0.404 id=18312514 bin=Haloredivivus tax=Haloredivivus
rifcsplowo2_01_scaffold_2006_6
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

5262..5504
-----------------
DNA (243bp)
protein (81aa)
Glutaredoxin-like protein, YruB-family id=2698725 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
glutaredoxin
rifcsplowo2_01_scaffold_2006_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

5516..6754
-----------------
DNA (1239bp)
protein (413aa)
Glutamate dehydrogenase id=5799766 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
GdhA2; glutamate dehydrogenase/leucine dehydrogenase
rifcsplowo2_01_scaffold_2006_8
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

6989..7786
-----------------
DNA (798bp)
protein (266aa)
hypothetical protein
id=5102999 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_2006_9

Not on your lists

comp(8190..10805)
-----------------
DNA (2616bp)
protein (872aa)
Cu2+-exporting ATPase (EC:3.6.3.4)
Heavy-metal transporting P-type ATPase id=5800398 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_2006_10
R_OD1_Wolfebacteria_45_10c, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(10823..11023)
-----------------
DNA (201bp)
protein (67aa)
transmembrane_regions id=5044093 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_2006_11

Not on your lists

comp(11034..11876)
-----------------
DNA (843bp)
protein (281aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F5X3_9BACT
hypothetical protein
rifcsplowo2_01_scaffold_2006_12
GWA2_OP11_47_9, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(11886..12161)
-----------------
DNA (276bp)
protein (92aa)
rifcsplowo2_01_scaffold_2006_13

Not on your lists

comp(12230..12988)
-----------------
DNA (759bp)
protein (253aa)
glucose 1-dehydrogenase (EC:1.1.1.47)
Short-chain dehydrogenase/reductase SDR id=1921147 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
rifcsplowo2_01_scaffold_2006_14
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(13052..13525)
-----------------
DNA (474bp)
protein (158aa)
hypothetical protein id=5041717 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_2006_15
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

13687..14100
-----------------
DNA (414bp)
protein (138aa)
PadR-like protein family transcriptional regulator
PadR-like family transcriptional regulator id=5240645 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_2006_16
RIFOXYB1_FULL_OD1_Azambacteria_40_33_curated, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(14129..14995)
-----------------
DNA (867bp)
protein (289aa)
cytochrome c biogenesis protein, transmembrane region id=129056 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
Cytochrome c biogenesis protein transmembrane region
rifcsplowo2_01_scaffold_2006_17

Not on your lists

comp(15005..15877)
-----------------
DNA (873bp)
protein (291aa)
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI0003734A59
hypothetical protein
rifcsplowo2_01_scaffold_2006_18

Not on your lists

comp(15934..16374)
-----------------
DNA (441bp)
protein (147aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B5611B
hypothetical protein
rifcsplowo2_01_scaffold_2006_19
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16371..16901)
-----------------
DNA (531bp)
protein (177aa)
"Winged helix" DNA-binding domain id=5800418 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_2006_20
Parcubacteria bacterium GW2011_GWA1_33_6, Parcubacteria, Bacteria

Not on your lists

16948..17961
-----------------
DNA (1014bp)
protein (338aa)
Uncharacterized protein id=5800423 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
rifcsplowo2_01_scaffold_2006_21
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17962..18750)
-----------------
DNA (789bp)
protein (263aa)
Prolipoprotein diacylglyceryl transferase n=3 Tax=Leptospirillum RepID=J9ZAT3_LEPFM
diacylglyceryl transferase
rifcsplowo2_01_scaffold_2006_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18792..19601)
-----------------
DNA (810bp)
protein (270aa)
rifcsplowo2_01_scaffold_2006_23
unknown

Not on your lists

comp(19636..20322)
-----------------
DNA (687bp)
protein (229aa)
ArsR family transcription regulator n=1 Tax=Natronomonas moolapensis 8.8.11 RepID=M1XRD6_9EURY id=5102960 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ArsR family transcription regulator
rifcsplowo2_01_scaffold_2006_24
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(20319..20945)
-----------------
DNA (627bp)
protein (209aa)
hypothetical protein
id=5102959 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_2006_25
unknown

Not on your lists

21130..21465
-----------------
DNA (336bp)
protein (112aa)
Uncharacterized protein n=2 Tax=Thermococcaceae RepID=C5A4H2_THEGJ id=5103057 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsplowo2_01_scaffold_2006_26
unknown

Not on your lists

21425..22033
-----------------
DNA (609bp)
protein (203aa)
Uncharacterized protein n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HKT3_THES4 id=5103056 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsplowo2_01_scaffold_2006_27
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

comp(22119..24746)
-----------------
DNA (2628bp)
protein (876aa)
rifcsplowo2_01_scaffold_2006_28

Not on your lists

comp(24749..25267)
-----------------
DNA (519bp)
protein (173aa)
id=5047505 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_2006_29

Not on your lists

25495..26322
-----------------
DNA (828bp)
protein (276aa)
hypothetical protein
id=3230410 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
rifcsplowo2_01_scaffold_2006_30

Not on your lists

26312..26503
-----------------
DNA (192bp)
protein (64aa)
hypothetical protein
id=3230411 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
Displaying items 1-30 of 34 in total

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