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rifcsplowo2_01_scaffold_16699

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_16699_1
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1..387)
DNA (387bp) protein (129aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Clostridium ultunense Esp RepID=M1ZLX1_9CLOT
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Tax=GWA2_OD1_40_9
rifcsplowo2_01_scaffold_16699_2
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(395..730)
DNA (336bp) protein (112aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FQI3_9CLOT
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Tax=GWA2_OD1_40_9
rifcsplowo2_01_scaffold_16699_3
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(936..2897)
DNA (1962bp) protein (654aa)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AAI2_THEID
1-deoxy-D-xylulose-5-phosphate synthase Tax=GWA2_OD1_40_9
deoxyxylulose-5-phosphate synthase
rifcsplowo2_01_scaffold_16699_4
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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3003..3215
DNA (213bp) protein (71aa)
hypothetical protein Tax=GWA2_OD1_40_9
rifcsplowo2_01_scaffold_16699_5
unknown

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3182..3622
DNA (441bp) protein (147aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16699_6

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3762..4442
DNA (681bp) protein (227aa)
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5047524 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L1 {ECO:0000313|EMBL:KHO45733.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L1
rifcsplowo2_01_scaffold_16699_7
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


4702..5772
DNA (1071bp) protein (357aa)
50S ribosomal protein L10 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVQ4_9EURY
Acidic ribosomal protein P0 homolog Tax=AR11
50S ribosomal protein L10
rifcsplowo2_01_scaffold_16699_8

Not on your lists

5974..6288
DNA (315bp) protein (105aa)
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
ribosomal protein 60S; K02869 large subunit ribosomal protein L12 id=5047526 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L12a (P1/P2)
rifcsplowo2_01_scaffold_16699_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

6302..7186
DNA (885bp) protein (295aa)
phosphoserine phosphatase serb (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] Tax=CG_Woesearch_02
hypothetical protein id=5047527 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_16699_10
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


comp(7526..7816)
DNA (291bp) protein (97aa)
30S ribosomal protein S24e n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJW2_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
30S ribosomal protein S24; K02974 small subunit ribosomal protein S24e
rifcsplowo2_01_scaffold_16699_11

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comp(7828..8013)
DNA (186bp) protein (62aa)
rpoE2; DNA-directed RNA polymerase subunit E'; K03050 DNA-directed RNA polymerase subunit E" [EC:2.7.7.6] id=5049217 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:KHO45208.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO45208.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
DNA-directed RNA polymerase, subunit E
rifcsplowo2_01_scaffold_16699_12
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


comp(8010..8642)
DNA (633bp) protein (211aa)
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ENO11844.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-
DNA-directed RNA polymerase subunit E
rifcsplowo2_01_scaffold_16699_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(8667..9065)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FD838
hypothetical protein; K07158 Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
rifcsplowo2_01_scaffold_16699_14
unknown

Not on your lists

9137..10000
DNA (864bp) protein (288aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16699_15
R_OD1_48_18, Parcubacteria, Bacteria

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10038..10676
DNA (639bp) protein (213aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_48_18_curated
hypothetical protein id=983381 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
rifcsplowo2_01_scaffold_16699_16
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

10738..11679
DNA (942bp) protein (314aa)
hypothetical protein Tax=GWA2_OD1_47_10b
rifcsplowo2_01_scaffold_16699_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11658..12248
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GA83_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN92829.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
rifcsplowo2_01_scaffold_16699_18

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comp(12262..12894)
DNA (633bp) protein (211aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52850.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifcsplowo2_01_scaffold_16699_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

12987..14114
DNA (1128bp) protein (376aa)
hypothetical protein; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] Tax=CG_Woesearch_02
rRNA (Guanine-N(2)-)-methyltransferase id=5800237 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA methylase
rifcsplowo2_01_scaffold_16699_20
unknown

Not on your lists

14268..14546
DNA (279bp) protein (93aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16699_21
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

15170..15346
DNA (177bp) protein (59aa)
hypothetical protein
Preprotein translocase Sec, Sec61-beta subunit Tax=RBG_13_Woesearchaeota_36_6_curated
id=5048386 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_16699_22
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

15352..15693
DNA (342bp) protein (114aa)
alpha-NAC related protein; K03626 nascent polypeptide-associated complex subunit alpha Tax=AR17
nac; nascent polypeptide-associated complex protein; K03626 nascent polypeptide-associated complex subunit alpha id=5044110 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Nascent polypeptide-associated complex protein
rifcsplowo2_01_scaffold_16699_23

Not on your lists

15745..16311
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000381BFF6
Cell wall surface anchor family protein {ECO:0000313|EMBL:KHO55611.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
rifcsplowo2_01_scaffold_16699_24
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

16399..16869
DNA (471bp) protein (157aa)
hypothetical protein
id=5800196 Tax=CG_Woesearch_01
id=5048389 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_16699_25
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

16900..17415
DNA (516bp) protein (172aa)
id=5048391 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
Displaying 25 items

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