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rifcsplowo2_01_scaffold_69883

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_69883_1

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2..367
-----------------
DNA (366bp)
protein (122aa)
50S ribosomal protein L30, large subunit ribosomal protein L30e {ECO:0000313|EMBL:KHO55780.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
large subunit ribosomal protein L30e
LSU ribosomal protein l30e; K02908 large subunit ribosomal protein L30e id=5241338 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_69883_2

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411..821
-----------------
DNA (411bp)
protein (137aa)
N utilization substance protein A {ECO:0000313|EMBL:KHO55781.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
nusA; N utilization substance protein A
nusA; transcription elongation factor NusA-like protein; K02600 N utilization substance protein A id=5241339 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_69883_3

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826..1248
-----------------
DNA (423bp)
protein (141aa)
30S ribosomal protein S12 {ECO:0000256|RuleBase:RU004490}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
30S ribosomal protein S12, small subunit ribosomal protein S12
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5241340 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_69883_4

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1255..1923
-----------------
DNA (669bp)
protein (223aa)
Small subunit ribosomal protein S7 {ECO:0000313|EMBL:KHO55783.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
small subunit ribosomal protein S7
30S ribosomal protein S5e (S7p); K02992 small subunit ribosomal protein S7 id=5241341 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_69883_5

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1956..4073
-----------------
DNA (2118bp)
protein (706aa)
Elongation factor 2 {ECO:0000256|SAAS:SAAS00088569}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
fusA; elongation factor 2
fusA; elongation factor EF-2; K03234 elongation factor 2 id=5241342 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_69883_6

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comp(4131..4493)
-----------------
DNA (363bp)
protein (121aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55785.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
rifcsplowo2_01_scaffold_69883_7

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4673..5938
-----------------
DNA (1266bp)
protein (422aa)
elongation factor 1-alpha (EC:2.7.7.4)
elongation factor 1-alpha (EC:2.7.7.4); K03231 elongation factor 1-alpha id=5241343 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
rifcsplowo2_01_scaffold_69883_8

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6003..6317
-----------------
DNA (315bp)
protein (105aa)
Small subunit ribosomal protein S10 {ECO:0000313|EMBL:KHO55787.1}; Flags: Fragment;; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
small subunit ribosomal protein S10
SSU ribosomal protein s10p; K02946 small subunit ribosomal protein S10 id=5241344 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_69883_9
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6389..6826
-----------------
DNA (438bp)
protein (146aa)
Protein archease n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEK2_9EURY
hypothetical protein
Protein archease {ECO:0000256|HAMAP-Rule:MF_01222}; TaxID=1094980 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psychrop
rifcsplowo2_01_scaffold_69883_10
unknown

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comp(6848..6976)
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

rifcsplowo2_01_scaffold_69883_11
unknown

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7011..7115
-----------------
DNA (105bp)
protein (35aa)

This feature has no annotations

Displaying 11 items

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