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rifcsplowo2_01_scaffold_5482_25

Organism: RIFCSPLOWO2_01_FULL_Diapherotrites_43_13

near complete RP 34 / 55 MC: 5 BSCG 21 / 51 ASCG 31 / 38 MC: 3
Location: 17202..17732

Top 3 Functional Annotations

Value Algorithm Source
transcription initiation factor TFIIE subunit alpha similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 173.0
  • Bit_score: 194
  • Evalue 3.00e-47
transcription factor TFIIE subunit alpha; K03136 transcription initiation factor TFIIE subunit alpha id=5241571 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 173.0
  • Bit_score: 194
  • Evalue 1.10e-46
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 173.0
  • Bit_score: 194
  • Evalue 1.50e-46

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Taxonomy

archaeon GW2011_AR10 → Archaea

Sequences

DNA sequence
Length: 531
TTGAAAAAAGAAATCCTTGATTTAAACATAACGAAGGATTTTTTGGCTGGAATAGCAGGAAAGCACGCGCCAGAATTGGCAAAAATAATGGTTGAAAAAAACAAGGACCTTACAGACGAGGAGATAAGCAAAAAACTCCCATTGAAAATAACAGAGATAAGAACGATACTAAACCAGCTGCATTACAGGGGAATCGCCTGCTATAACAAGGCCAAGACAAAAAGAAGCGGGTGGTACAACTACACCTGGAACATAAGGACAAAAAGAATAGCAGAACTGCTGCTTGAGAAAAAAGTAGAAGAGCAAGCAAAGATGGAAAAAAAGCAGGAGATGGAAAAGAATTACGAAATATTCGAGTGCGCAAACAGCTGCAGCCAGATGGTTTTTGAGATAGCCGCAGAATACCAGTTCAAATGCCCTGAATGCGGAAAGCCAATGAACCTGGCAAACGGAAGAAAAATCAGCAAAGCAAGCAGCCAAAGGATTGAAAGCATAAAAAGAGAGATAAGCGTGCTAAAAAAAGCAGTATAG
PROTEIN sequence
Length: 177
LKKEILDLNITKDFLAGIAGKHAPELAKIMVEKNKDLTDEEISKKLPLKITEIRTILNQLHYRGIACYNKAKTKRSGWYNYTWNIRTKRIAELLLEKKVEEQAKMEKKQEMEKNYEIFECANSCSQMVFEIAAEYQFKCPECGKPMNLANGRKISKASSQRIESIKREISVLKKAV*