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rifcsplowo2_01_scaffold_5482

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_5482_1
unknown

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3..131
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5482_2

Not on your lists

136..1071
-----------------
DNA (936bp)
protein (312aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
nucleoside-diphosphate-sugar epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] id=5241621 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AJF60612.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AJF60612.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsplowo2_01_scaffold_5482_3
unknown

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comp(1152..1886)
-----------------
DNA (735bp)
protein (245aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5482_4
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(1891..2607)
-----------------
DNA (717bp)
protein (239aa)
geranylgeranylglyceryl phosphate synthase; K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-] id=5241617 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
geranylgeranylglyceryl phosphate synthase; K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-] Tax=AR10
hypothetical protein
rifcsplowo2_01_scaffold_5482_5
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(2690..3340)
-----------------
DNA (651bp)
protein (217aa)
Beta-lactamase domain protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RG26_ARCPA
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:ADB57251.1}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus profu
rifcsplowo2_01_scaffold_5482_6
unknown

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3370..3831
-----------------
DNA (462bp)
protein (154aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5482_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3906..4055
-----------------
DNA (150bp)
protein (50aa)
fused DNA topoisomerase I/SWI domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Fused DNA topoisomerase I/SWI domain-containing protein id=4863511 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fused DNA topoisomerase I/SWI domain-containing protein
rifcsplowo2_01_scaffold_5482_8
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

4142..5431
-----------------
DNA (1290bp)
protein (430aa)
replication factor A1
nucleic acid binding OB-fold tRNA/helicase-type; K07466 replication factor A1 id=5241616 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
nucleic acid binding OB-fold tRNA/helicase-type; K07466 replication factor A1 Tax=AR10
rifcsplowo2_01_scaffold_5482_9
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

5609..6610
-----------------
DNA (1002bp)
protein (334aa)
radA; DNA repair protein RadA
radA; DNA repair and recombination protein RadA; K04483 DNA repair protein RadA id=5241615 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
radA; DNA repair and recombination protein RadA; K04483 DNA repair protein RadA Tax=AR10
rifcsplowo2_01_scaffold_5482_10
unknown

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6686..7348
-----------------
DNA (663bp)
protein (221aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5482_11
Brachyspira pilosicoli, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

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comp(7354..7590)
-----------------
DNA (237bp)
protein (79aa)
Uncharacterized protein n=4 Tax=Brachyspira pilosicoli RepID=D8IDS3_BRAP9
hybrid cluster protein
Hybrid cluster protein {ECO:0000313|EMBL:AFR69447.1}; TaxID=1133568 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira pilosicoli B2904.;"
rifcsplowo2_01_scaffold_5482_12
GWA2_OD1_Kaiserbacteria_50_9_curated, Kaiserbacteria, Parcubacteria, Bacteria

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comp(7794..8900)
-----------------
DNA (1107bp)
protein (369aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=GWA2_OD1_Kaiserbacteria_50_9_curated
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] id=5043744 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
rifcsplowo2_01_scaffold_5482_13

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9093..9452
-----------------
DNA (360bp)
protein (120aa)
hypothetical protein
Putative uncharacterized protein id=18248501 bin=AR5_curated_draft species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Uncharacterized protein {ECO:0000313|EMBL:KHO48504.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
rifcsplowo2_01_scaffold_5482_14
unknown

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9537..9839
-----------------
DNA (303bp)
protein (101aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5482_15
unknown

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comp(9861..10166)
-----------------
DNA (306bp)
protein (102aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5482_16
unknown

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comp(10362..10730)
-----------------
DNA (369bp)
protein (123aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5482_17
unknown

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comp(10741..11112)
-----------------
DNA (372bp)
protein (124aa)
hypothetical protein
rifcsplowo2_01_scaffold_5482_18
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

11209..13047
-----------------
DNA (1839bp)
protein (613aa)
GTP pyrophosphokinase (EC:2.7.6.5)
GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp synthetase I) ((P)ppGpp synthetase) (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] id=5241595 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp synthetase I) ((P)ppGpp synthetase) (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=AR10
rifcsplowo2_01_scaffold_5482_19
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

13106..13843
-----------------
DNA (738bp)
protein (246aa)
hypothetical protein
hypothetical protein id=5241590 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein Tax=AR10
rifcsplowo2_01_scaffold_5482_20
unknown

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comp(13851..13958)
-----------------
DNA (108bp)
protein (36aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5482_21
unknown

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comp(14036..14290)
-----------------
DNA (255bp)
protein (85aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5482_22
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

14457..14885
-----------------
DNA (429bp)
protein (143aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000368BEB5
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
rifcsplowo2_01_scaffold_5482_23

Not on your lists

comp(15199..16563)
-----------------
DNA (1365bp)
protein (455aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] id=5241573 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
rifcsplowo2_01_scaffold_5482_24
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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16614..17159
-----------------
DNA (546bp)
protein (182aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GX36_METFV
hypothetical protein
rifcsplowo2_01_scaffold_5482_25

Not on your lists

17202..17732
-----------------
DNA (531bp)
protein (177aa)
transcription initiation factor TFIIE subunit alpha
transcription factor TFIIE subunit alpha; K03136 transcription initiation factor TFIIE subunit alpha id=5241571 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
rifcsplowo2_01_scaffold_5482_26
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

18403..18825
-----------------
DNA (423bp)
protein (141aa)
hypothetical protein
id=5241570 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
rifcsplowo2_01_scaffold_5482_27
unknown

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comp(18811..19080)
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

Displaying 27 items

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