ggKbase home page

rifcsplowo2_01_scaffold_2113

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_2113_1
unknown

Not on your lists

comp(1..333)
-----------------
DNA (333bp)
protein (111aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2113_2
unknown

Not on your lists

comp(434..574)
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2113_3
unknown

Not on your lists

comp(586..1380)
-----------------
DNA (795bp)
protein (265aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2113_4
unknown

Not on your lists

1533..2435
-----------------
DNA (903bp)
protein (301aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2113_5
unknown

Not on your lists

comp(2457..3401)
-----------------
DNA (945bp)
protein (315aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2113_6

Not on your lists

3572..4294
-----------------
DNA (723bp)
protein (241aa)
DSBA oxidoreductase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5N9_NITMS id=5103511 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:AJF62792.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_2113_7
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(4351..4815)
-----------------
DNA (465bp)
protein (155aa)
Uncharacterized HTH-type transcriptional regulator PF1734 n=2 Tax=Pyrococcus furiosus RepID=REG8_PYRFU
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AFN04908.1}; TaxID=1185654 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus COM1.;"
rifcsplowo2_01_scaffold_2113_8
unknown

Not on your lists

4844..5110
-----------------
DNA (267bp)
protein (89aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2113_9
unknown

Not on your lists

5157..5672
-----------------
DNA (516bp)
protein (172aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2113_10
unknown

Not on your lists

comp(5909..6691)
-----------------
DNA (783bp)
protein (261aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2113_11
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

6910..7158
-----------------
DNA (249bp)
protein (83aa)
rpoH; DNA-directed RNA polymerase subunit H; K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] Tax=Altiarchaeum hamiconexum
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000373033A
rifcsplowo2_01_scaffold_2113_12

Not on your lists

7148..8668
-----------------
DNA (1521bp)
protein (507aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:KHO54685.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO54685.1};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E7919
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_2113_13
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

8665..10467
-----------------
DNA (1803bp)
protein (601aa)
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] Tax=AR17
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003719CEA
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_2113_14

Not on your lists

10490..13069
-----------------
DNA (2580bp)
protein (860aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036BE5C7
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_2113_15

Not on your lists

13104..15683
-----------------
DNA (2580bp)
protein (860aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037417CB
DNA-directed RNA polymerase subunit A''
DNA-directed RNA polymerase subunit A {ECO:0000313|EMBL:AJF63054.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_2113_16

Not on your lists

15727..15990
-----------------
DNA (264bp)
protein (88aa)
Marine sediment metagenome DNA, contig: S01H1_S20770 {ECO:0000313|EMBL:GAG19745.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_01_scaffold_2113_17

Not on your lists

15992..16426
-----------------
DNA (435bp)
protein (145aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374B7B8
Marine sediment metagenome DNA, contig: S01H1_S20770 {ECO:0000313|EMBL:GAG19749.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
NusA family KH domain-containing protein
rifcsplowo2_01_scaffold_2113_18

Not on your lists


16444..16881
-----------------
DNA (438bp)
protein (146aa)
30S ribosomal protein S12 {ECO:0000256|RuleBase:RU004490}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5043966 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S12
rifcsplowo2_01_scaffold_2113_19

Not on your lists


16909..17502
-----------------
DNA (594bp)
protein (198aa)
Small subunit ribosomal protein S7 {ECO:0000313|EMBL:KHO52604.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 id=5048329 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S7
rifcsplowo2_01_scaffold_2113_20
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(17686..18168)
-----------------
DNA (483bp)
protein (161aa)
hypothetical protein
HEPN Tax=CG_Woesearch_01
HEPN id=5043676 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_2113_21
GWA2_OP11_38_24, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(18156..18764)
-----------------
DNA (609bp)
protein (203aa)
id=5043675 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein Tax=GWA2_OP11_38_24
rifcsplowo2_01_scaffold_2113_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(19267..21165)
-----------------
DNA (1899bp)
protein (633aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036EAF14
KH-domain/beta-lactamase-domain-containing protein; K07041 Tax=CG_Woesearch_02
kh-domain/beta-lactamase-domain-containing protein
rifcsplowo2_01_scaffold_2113_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(21214..21858)
-----------------
DNA (645bp)
protein (215aa)
proteasome endopeptidase complex subunit beta (EC:3.4.25.1); K03433 proteasome beta subunit [EC:3.4.25.1] Tax=CG_Woesearch_02
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003791C71
Proteasome subunit beta
rifcsplowo2_01_scaffold_2113_24
unknown

Not on your lists

comp(22040..22306)
-----------------
DNA (267bp)
protein (89aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2113_25

Not on your lists


comp(22419..23648)
-----------------
DNA (1230bp)
protein (410aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C7B09
tRNA nucleotidyltransferase CCA-adding enzyme
rifcsplowo2_01_scaffold_2113_26
unknown

Not on your lists

comp(23743..24033)
-----------------
DNA (291bp)
protein (97aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2113_27
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(24077..24454)
-----------------
DNA (378bp)
protein (126aa)
hypothetical protein Tax=AR11
rifcsplowo2_01_scaffold_2113_28
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists

24515..25342
-----------------
DNA (828bp)
protein (276aa)
Uncharacterized protein n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZL82_THELI
Endonuclease IV Tax=GWC2_CPR2_39_10
hypothetical protein
rifcsplowo2_01_scaffold_2113_29
unknown

Not on your lists

comp(25339..26709)
-----------------
DNA (1371bp)
protein (457aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2113_30
unknown

Not on your lists

comp(26746..27642)
-----------------
DNA (897bp)
protein (299aa)
RNA methylase, NOL1/NOP2/sun family n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2T5_FERPA id=5103608 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNA methylase, NOL1/NOP2/sun family n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2T5_FERPA Tax=AR20
RNA methylase, NOL1/NOP2/sun family
Displaying items 1-30 of 32 in total

View Taxonomy