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rifcsplowo2_01_scaffold_15852

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_15852_1
unknown

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comp(1..243)
DNA (243bp) protein (81aa)

This feature has no annotations

rifcsplowo2_01_scaffold_15852_2
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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302..724
DNA (423bp) protein (141aa)
transmembrane_regions 110..132 id=31599 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
Putative uncharacterized protein Tax=GWA2_PER_44_7
rifcsplowo2_01_scaffold_15852_3
unknown

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740..1024
DNA (285bp) protein (95aa)

This feature has no annotations

rifcsplowo2_01_scaffold_15852_4

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comp(1027..2376)
DNA (1350bp) protein (450aa)
CoA-binding domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI26_9EURY id=5103524 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
CoA-binding protein
CoA-binding protein {ECO:0000313|EMBL:AJF62805.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_15852_5
R_OD1_Yanofskybacteria_38_22b, Yanofskybacteria, Parcubacteria, Bacteria

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comp(2403..2645)
DNA (243bp) protein (81aa)
Glutaredoxin-like protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C622_9CLOT
Glutaredoxin-like protein, YruB-family Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_38_22b_curated
hypothetical protein
rifcsplowo2_01_scaffold_15852_6
AR9, Woesearchaeaota, DPANN, Archaea

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2731..3336
DNA (606bp) protein (202aa)
S-adenosylmethionine-dependent methyltransferase n=3 Tax=Clostridium acetobutylicum RepID=F0KA45_CLOAE
hypothetical protein Tax=AR9
S-adenosylmethionine-dependent methyltransferase
rifcsplowo2_01_scaffold_15852_7

Not on your lists

comp(3333..3755)
DNA (423bp) protein (141aa)
PadR-like protein family transcriptional regulator
PadR-like family transcriptional regulator id=5240645 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
PadR-like protein family transcriptional regulator {ECO:0000313|EMBL:AJF59638.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsplowo2_01_scaffold_15852_8
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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3830..4033
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WUP3_9SYNE
Uncharacterized protein {ECO:0000313|EMBL:KGF73993.1}; TaxID=1497020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola sy
hypothetical protein
rifcsplowo2_01_scaffold_15852_9
R_RIF_OD1_03_45_10, RIF-OD1-3, Parcubacteria, Bacteria

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4118..6544
DNA (2427bp) protein (809aa)
heavy metal translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_45_10_curated
copA; copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
ATPase n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B7A92F
rifcsplowo2_01_scaffold_15852_10

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6541..7176
DNA (636bp) protein (212aa)
Integral membrane protein n=1 Tax=Helcococcus kunzii ATCC 51366 RepID=H3NNL6_9FIRM id=5103510 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:AJF62791.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_15852_11

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comp(7270..8520)
DNA (1251bp) protein (417aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQJ1_METIM id=5103750 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Translation initiation factor 2 subunit gamma
Translation initiation factor 2 subunit gamma {ECO:0000313|EMBL:AJF63028.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_15852_12
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(8600..8896)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003670EAE
Tax=CG_Woesearch_01
rifcsplowo2_01_scaffold_15852_13
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(8893..9291)
DNA (399bp) protein (133aa)
30S ribosomal protein S6e n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BF39_METIK
30S ribosomal protein S6
30S ribosomal protein S6e {ECO:0000256|HAMAP-Rule:MF_00512, ECO:0000256|SAAS:SAAS00018829}; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanot
rifcsplowo2_01_scaffold_15852_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(9292..11016)
DNA (1725bp) protein (575aa)
Probable translation initiation factor IF-2 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY66_METFV id=5103748 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
InfB_2; translation initiation factor IF-2; K03243 translation initiation factor 5B Tax=CG_Woesearch_02
putative translation initiation factor IF-2
Displaying 14 items

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