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rifcsplowo2_01_scaffold_14698

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_14698_1
unknown

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2..703
DNA (702bp) protein (234aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14698_2
unknown

Not on your lists

814..933
DNA (120bp) protein (40aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14698_3
unknown

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comp(965..1609)
DNA (645bp) protein (215aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14698_4

Not on your lists

comp(1789..2370)
DNA (582bp) protein (194aa)
16S rRNA m(2)G 1207 methyltransferase (EC:2.1.1.171)
Methyltransferase small id=5800230 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Methyltransferase small {ECO:0000313|EMBL:AJF61561.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsplowo2_01_scaffold_14698_5
Methanobrevibacter ruminantium, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(2370..2564)
DNA (195bp) protein (65aa)
50S ribosomal protein L37e n=1 Tax=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) RepID=D3E3M0_METRM
ribosomal protein L37e Rpl37e
50S ribosomal protein L37e {ECO:0000256|HAMAP-Rule:MF_00547, ECO:0000256|SAAS:SAAS00257304}; TaxID=634498 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Met
rifcsplowo2_01_scaffold_14698_6
AR15, Woesearchaeaota, DPANN, Archaea

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comp(2566..2793)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000367D4C7
Like-Sm ribonucleoprotein core
Like-Sm ribonucleoprotein core Tax=AR15
rifcsplowo2_01_scaffold_14698_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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2869..3246
DNA (378bp) protein (126aa)
30S ribosomal protein S8; K02995 small subunit ribosomal protein S8e Tax=RBG_13_Woesearchaeota_36_6_curated
SSU ribosomal protein s8e; K02995 small subunit ribosomal protein S8e id=5048696 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S8e
rifcsplowo2_01_scaffold_14698_8

Not on your lists

3458..4369
DNA (912bp) protein (304aa)
Transcription initiation factor IIB n=4 Tax=Archaeoglobaceae RepID=TF2B_ARCFU id=5103059 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_14698_9
unknown

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4395..4550
DNA (156bp) protein (52aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14698_10
unknown

Not on your lists

4902..5696
DNA (795bp) protein (265aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14698_11

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comp(5676..6569)
DNA (894bp) protein (298aa)
rnz; ribonuclease Z Rnz (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] id=5046343 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
RNAse Z
rifcsplowo2_01_scaffold_14698_12
CG_Woesearch_02, Woesearchaeota, Archaea

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6620..7192
DNA (573bp) protein (191aa)
tRNA-splicing endonuclease subunit alpha (EC:3.1.27.9); K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=CG_Woesearch_02
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FB5D0
tRNA-intron endonuclease
rifcsplowo2_01_scaffold_14698_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

7236..8132
DNA (897bp) protein (299aa)
hypothetical protein
id=5046345 Tax=RBG_13_Woesearchaeota_36_6_curated
id=5103053 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_14698_14
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(8119..8796)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWG2_METFV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP77927.1}; Flags: Precursor;; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source
rifcsplowo2_01_scaffold_14698_15
AR1, Pacearchaeaota, DPANN, Archaea

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8881..9987
DNA (1107bp) protein (369aa)
hypothetical protein Tax=AR1
hypothetical protein id=5091354 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
rifcsplowo2_01_scaffold_14698_16
unknown

Not on your lists

10013..11341
DNA (1329bp) protein (443aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14698_17
unknown

Not on your lists

comp(11342..11653)
DNA (312bp) protein (104aa)

This feature has no annotations

Displaying 17 items

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