ggKbase home page

rifcsplowo2_01_scaffold_1855

Search features with annotation key words

Displaying items 1-30 of 80 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_1855_1
unknown

Not on your lists

comp(2..142)
DNA (141bp) protein (47aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1855_2
unknown

Not on your lists

235..582
DNA (348bp) protein (116aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1855_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

666..2420
DNA (1755bp) protein (585aa)
T1SS secreted agglutinin (RTX) Tax=RBG_13_Pacearchaeota_36_9_curated
putative hemolysin id=5046334 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_1855_4

Not on your lists

2459..3427
DNA (969bp) protein (323aa)
hypothetical protein
id=5049706 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53563.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsplowo2_01_scaffold_1855_5
Staphylothermus hellenicus, Staphylothermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(3419..4069)
DNA (651bp) protein (217aa)
ATP-grasp domain protein n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7D966_STAHD
ATP-grasp domain-containing protein
ATP-grasp domain protein {ECO:0000313|EMBL:ADI32312.1}; TaxID=591019 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Staphylothermus.;" source="Staphylothermus he
rifcsplowo2_01_scaffold_1855_6

Not on your lists

4246..6168
DNA (1923bp) protein (641aa)
transglutaminase-like superfamily protein id=5049708 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Transglutaminase-like protein superfamily protein {ECO:0000313|EMBL:KHO53565.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Transglutaminase protein
rifcsplowo2_01_scaffold_1855_7
unknown

Not on your lists

comp(6155..6292)
DNA (138bp) protein (46aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1855_8
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(6346..6621)
DNA (276bp) protein (92aa)
TM2 domain containing protein n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DR76_METV3
TM2 domain-containing protein
Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_1855_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(6696..7682)
DNA (987bp) protein (329aa)
ORC complex protein Cdc6/Orc1 Tax=RBG_13_Woesearchaeota_36_6_curated
cdc6; cell division control protein 6; K10725 archaeal cell division control protein 6 id=5050980 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ORC1-type DNA replication protein
rifcsplowo2_01_scaffold_1855_10
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(7744..9354)
DNA (1611bp) protein (537aa)
Putative uncharacterized protein Tax=CG_Anaero_01
Putative uncharacterized protein id=2026329 bin=GWD2_Chloroflexi_49_16 species=Marichromatium purpuratum genus=Marichromatium taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good + rbh
hypothetical protein
rifcsplowo2_01_scaffold_1855_11
unknown

Not on your lists

comp(9356..10252)
DNA (897bp) protein (299aa)
Signal peptide peptidase SppA, 36K type n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AES0_9EURY id=5103042 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Signal peptide peptidase SppA, 36K type n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AES0_9EURY Tax=AR20
Signal peptide peptidase SppA, 36K type
rifcsplowo2_01_scaffold_1855_12
unknown

Not on your lists

comp(10249..10803)
DNA (555bp) protein (185aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1855_13
unknown

Not on your lists

comp(10832..11077)
DNA (246bp) protein (82aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1855_14
unknown

Not on your lists

comp(11314..11445)
DNA (132bp) protein (44aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1855_15
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

11557..13248
DNA (1692bp) protein (564aa)
Histone acetyltransferase Elp3 like protein; K07739 elongator complex protein 3 [EC:2.3.1.48] Tax=RBG_13_Woesearchaeota_36_6_curated
Histone acetyltransferase Elp3 like protein; K07739 elongator complex protein 3 [EC:2.3.1.48] id=5044155 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Histone acetyltransferase Elp3 like protein
rifcsplowo2_01_scaffold_1855_16
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

13303..13689
DNA (387bp) protein (129aa)
hypothetical protein
id=5103695 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_1855_17

Not on your lists


13713..14000
DNA (288bp) protein (96aa)
50S ribosomal protein L21e n=2 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL21_NANEQ id=5103694 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L21e
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_1855_18

Not on your lists

14002..14343
DNA (342bp) protein (114aa)
Conserved protein n=2 Tax=Methanothermobacter RepID=O27379_METTH id=5103693 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62971.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_1855_19

Not on your lists

14361..14933
DNA (573bp) protein (191aa)
DNA-binding protein n=3 Tax=Pyrococcus RepID=Q8TZW3_PYRFU id=5103692 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AJF62970.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_1855_20

Not on your lists


15241..16539
DNA (1299bp) protein (433aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1579378 species="Archaea.;"
Histidine--tRNA ligase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVR1_9BACT id=5103662 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Histidine-tRNA ligase
rifcsplowo2_01_scaffold_1855_21

Not on your lists


16604..17074
DNA (471bp) protein (157aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ id=5103690 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_1855_22
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


17078..17683
DNA (606bp) protein (202aa)
30S ribosomal protein S4 Tax=RBG_13_Woesearchaeota_36_6_curated
rps4p; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=5051520 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S4
rifcsplowo2_01_scaffold_1855_23
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


17680..18084
DNA (405bp) protein (135aa)
rps11p; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=CG_Woesearch_01
rps11p; 30S ribosomal protein S11P; K02948 small subunit ribosomal protein S11 id=5051521 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S11
rifcsplowo2_01_scaffold_1855_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

18041..18868
DNA (828bp) protein (276aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=CG_Woesearch_02
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=5049647 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit D
rifcsplowo2_01_scaffold_1855_25
unknown

Not on your lists

19064..19357
DNA (294bp) protein (98aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1855_26

Not on your lists


19359..19721
DNA (363bp) protein (121aa)
50S ribosomal protein L18e n=2 Tax=Staphylothermus RepID=A3DMQ7_STAMF id=5103681 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L18e
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_1855_27

Not on your lists


19723..20133
DNA (411bp) protein (137aa)
50S ribosomal protein L13P n=10 Tax=Thermococcus RepID=RL13_PYRKO id=5103680 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S01H1_S00916 {ECO:0000313|EMBL:GAF93287.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L13P
rifcsplowo2_01_scaffold_1855_28

Not on your lists


20135..20530
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZF5_METFV id=5103678 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|RuleBase:RU003817}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_1855_29
RLO_OD1_41_13, Parcubacteria, Bacteria

Not on your lists

comp(20641..21204)
DNA (564bp) protein (188aa)
peroxiredoxin; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] Tax=RIFCSPLOWO2_12_FULL_OD1_41_13_curated
prx2-1; 2-cysteine peroxiredoxin (EC:1.11.1.15); K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] id=5050388 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
prx2-1; 2-cysteine peroxiredoxin (EC:1.11.1.15)
rifcsplowo2_01_scaffold_1855_30
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


21235..21519
DNA (285bp) protein (95aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6); K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] id=5045700 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit N (EC:2.7.7.6); K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] Tax=AR18
DNA-directed RNA polymerase subunit N
Displaying items 1-30 of 80 in total

View Taxonomy