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rifcsplowo2_01_scaffold_20587

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_20587_1
AR20, Woesearchaeaota, DPANN, Archaea

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1..1002
DNA (1002bp) protein (334aa)
hypothetical protein
id=5103316 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_20587_2
AR20, Woesearchaeaota, DPANN, Archaea

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968..2398
DNA (1431bp) protein (477aa)
hypothetical protein
id=5103317 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_20587_3

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comp(2412..3059)
DNA (648bp) protein (216aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50802.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
transmembrane_regions id=5226927 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rifcsplowo2_01_scaffold_20587_4

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comp(3061..4296)
DNA (1236bp) protein (412aa)
Glycosyl transferase family 2 {ECO:0000313|EMBL:KHO50801.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
Glycosyltransferase involved in cell wall biogenesis id=5226926 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Glycosyltransferase involved in cell wall biogenesis
rifcsplowo2_01_scaffold_20587_5
CG_Woesearch_02, Woesearchaeota, Archaea

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4431..4889
DNA (459bp) protein (153aa)
Putative transcription factor, MBF1 like protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HQL5_ACIS0 id=5103321 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
helix-turn-helix domain-containing protein; K03627 putative transcription factor Tax=CG_Woesearch_02
hypothetical protein
rifcsplowo2_01_scaffold_20587_6

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4886..5518
DNA (633bp) protein (211aa)
Methyltransferase-like protein {ECO:0000313|EMBL:KHO52523.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
RNA methylase id=5799774 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA methylase
rifcsplowo2_01_scaffold_20587_7

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5544..5816
DNA (273bp) protein (91aa)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
DNA-directed RNA polymerase subunit L n=2 Tax=Methanobacterium RepID=K6SZJ9_9EURY id=5103326 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit L
rifcsplowo2_01_scaffold_20587_8
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(5813..6766)
DNA (954bp) protein (318aa)
Thioredoxin reductase (trxB-3); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=5042292 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=CG_Pacearch_05
Thioredoxin reductase TrxB-3
rifcsplowo2_01_scaffold_20587_9
AR4, Woesearchaeaota, DPANN, Archaea

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6813..7466
DNA (654bp) protein (218aa)
Peptidase S26B, eukaryotic signal peptidase id=5043727 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Peptidase S26B, eukaryotic signal peptidase Tax=AR4
hypothetical protein
rifcsplowo2_01_scaffold_20587_10

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7470..7784
DNA (315bp) protein (105aa)
Transcription-associated protein TFIIS n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VZ68_9EURY id=5103330 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S01H1_S38339 {ECO:0000313|EMBL:GAG48814.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Transcription-associated protein TFIIS
rifcsplowo2_01_scaffold_20587_11
unknown

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7788..8093
DNA (306bp) protein (102aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20587_12
unknown

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8123..8491
DNA (369bp) protein (123aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20587_13
AR18, Woesearchaeaota, DPANN, Archaea

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8540..9058
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B7809
hypothetical protein; K04802 proliferating cell nuclear antigen Tax=AR18
DNA polymerase sliding clamp
Displaying 13 items

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