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rifcsplowo2_01_scaffold_10539

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_10539_1
unknown

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2..277
DNA (276bp) protein (92aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10539_2
GWA1_OP11_42_6_partial, Daviesbacteria, Microgenomates, Bacteria

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comp(283..627)
DNA (345bp) protein (115aa)
Putative deoxyribonuclease/rho motif-related TRAM n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INF3_NITGG id=5103220 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Deoxyribonuclease/rho motif-related TRAM {ECO:0000313|EMBL:KKS64513.1}; TaxID=1618420 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_42_6.;"
rifcsplowo2_01_scaffold_10539_3
CG_Pacearch_04, Pacearchaeota, Archaea

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890..3751
DNA (2862bp) protein (954aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5)
isoleucyl-tRNA synthetase Tax=CG_Pacearch_04
Isoleucine--tRNA ligase id=5800603 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_10539_4
AR18, Woesearchaeaota, DPANN, Archaea

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3888..4388
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036942D7
2-alkenal reductase; K03120 transcription initiation factor TFIID TATA-box-binding protein Tax=AR18
TATA-box-binding protein
rifcsplowo2_01_scaffold_10539_5
CG_Woesearch_01, Woesearchaeota, Archaea

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4397..5866
DNA (1470bp) protein (490aa)
prolyl-tRNA synthetase (EC:6.1.1.16); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=CG_Woesearch_01
prolyl-tRNA synthetase (EC:6.1.1.16)
Proline--tRNA ligase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=SYP_THEPD
rifcsplowo2_01_scaffold_10539_6
unknown

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5977..8049
DNA (2073bp) protein (691aa)
DNA replication initiator (Cdc21/Cdc54) n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AET4_9EURY id=5103224 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA replication initiator (Cdc21/Cdc54) n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AET4_9EURY Tax=AR20
DNA replication initiator Cdc21/Cdc54
rifcsplowo2_01_scaffold_10539_7

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8059..8721
DNA (663bp) protein (221aa)
Uncharacterized protein conserved in archaea n=2 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QHY8_9EURY id=5103225 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62506.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_10539_8
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8723..9217)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAE4_METMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE36145.1}; Flags: Precursor;; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" sou
rifcsplowo2_01_scaffold_10539_9
unknown

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9304..9714
DNA (411bp) protein (137aa)
Translation initiation factor 2 subunit beta n=2 Tax=Methanothermobacter RepID=IF2B_METTH Tax=AR20
Translation initiation factor 2 subunit beta n=2 Tax=Methanothermobacter RepID=IF2B_METTH id=5103227 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Translation initiation factor 2 subunit beta
rifcsplowo2_01_scaffold_10539_10
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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9715..10002
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZQX5_THELI
hypothetical protein; K09148 hypothetical protein Tax=CG_Aenigma_01
hypothetical protein
rifcsplowo2_01_scaffold_10539_11

Not on your lists

9986..10315
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HJD2_PYRSN id=5103229 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO51642.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
rifcsplowo2_01_scaffold_10539_12
AR18, Woesearchaeaota, DPANN, Archaea

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10340..10672
DNA (333bp) protein (111aa)
translation initiation factor eIF-1A; K03236 translation initiation factor 1A id=5048850 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
translation initiation factor eIF-1A; K03236 translation initiation factor 1A Tax=AR18
Translation initiation factor 1A
rifcsplowo2_01_scaffold_10539_13
CG_Woesearch_02, Woesearchaeota, Archaea

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10674..11204
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003723D19
KH domain protein; K06961 ribosomal RNA assembly protein Tax=CG_Woesearch_02
kh domain-containing protein
rifcsplowo2_01_scaffold_10539_14
unknown

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comp(11192..11908)
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAK5_METMS id=5103592 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAK5_METMS Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_10539_15
AR9, Woesearchaeaota, DPANN, Archaea

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12010..12564
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003609EBC
LemA family protein; K03744 LemA protein Tax=AR9
LemA family protein
rifcsplowo2_01_scaffold_10539_16
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

12567..13427
DNA (861bp) protein (287aa)
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=AR9
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] id=27638 bin=ACD24 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
hypothetical protein
rifcsplowo2_01_scaffold_10539_17
unknown

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comp(13430..13543)
DNA (114bp) protein (38aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10539_18
unknown

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comp(13540..13893)
DNA (354bp) protein (118aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10539_19
Thermococcus paralvinellae, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(13898..14203)
DNA (306bp) protein (102aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=582419 species="Archaea; E
Methionine--tRNA ligase n=1 Tax=Pyrococcus sp. ST04 RepID=I3REB0_9EURY
methionyl-tRNA synthetase
Displaying 19 items

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