ggKbase home page

rifcsplowo2_01_scaffold_7949

Search features with annotation key words

Displaying 27 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_7949_1
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

3..533
DNA (531bp) protein (177aa)
hypothetical protein
id=5103412 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_7949_2
unknown

Not on your lists

517..1047
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZ68_9EURY id=5103413 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZ68_9EURY Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_7949_3
unknown

Not on your lists

comp(1064..1171)
DNA (108bp) protein (36aa)

This feature has no annotations

rifcsplowo2_01_scaffold_7949_4
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(1173..2828)
DNA (1656bp) protein (552aa)
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=AR4
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374A334
Phenylalanine-tRNA ligase beta subunit
rifcsplowo2_01_scaffold_7949_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(2830..4344)
DNA (1515bp) protein (505aa)
Phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=CG_Woesearch_02
Phenylalanine--tRNA ligase alpha subunit id=5800822 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Phenylalanine-tRNA ligase alpha subunit
rifcsplowo2_01_scaffold_7949_6
unknown

Not on your lists

comp(4381..4629)
DNA (249bp) protein (83aa)

This feature has no annotations

rifcsplowo2_01_scaffold_7949_7

Not on your lists

comp(4635..5447)
DNA (813bp) protein (271aa)
hypothetical protein id=5042335 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46833.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_7949_8
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

5695..6039
DNA (345bp) protein (115aa)
Ribonuclease P protein component 2 n=2 Tax=Thermococcus RepID=RNP2_THEGJ id=5103841 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribonuclease P protein component 2 Tax=AR17
Ribonuclease P protein component 2
rifcsplowo2_01_scaffold_7949_9
unknown

Not on your lists

6041..6757
DNA (717bp) protein (239aa)
Proteasome subunit alpha n=3 Tax=Thermococcus RepID=PSA_THESM id=5103842 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Proteasome subunit alpha n=3 Tax=Thermococcus RepID=PSA_THESM Tax=AR20
Proteasome subunit alpha
rifcsplowo2_01_scaffold_7949_10

Not on your lists


6763..7461
DNA (699bp) protein (233aa)
Ribosome maturation protein SDO1 homolog n=4 Tax=Methanocaldococcus RepID=SDO1_METJA id=5103843 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribosome maturation protein SDO1-like protein
Ribosome maturation protein SDO1-like protein {ECO:0000313|EMBL:AJF63121.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_7949_11

Not on your lists

7485..8171
DNA (687bp) protein (229aa)
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 id=5046927 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
putative exosome complex RNA-binding protein 1
rifcsplowo2_01_scaffold_7949_12

Not on your lists

8168..8878
DNA (711bp) protein (237aa)
exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 id=5045976 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Exosome complex component RRP41 {ECO:0000313|EMBL:KHO45786.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
exosome complex exonuclease Rrp41
rifcsplowo2_01_scaffold_7949_13

Not on your lists

8868..9656
DNA (789bp) protein (263aa)
Exosome complex component RRP42 {ECO:0000313|EMBL:KHO52038.1}; EC=3.1.13.- {ECO:0000313|EMBL:KHO52038.1};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
rrp42p; exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-); K12589 exosome complex component RRP42 id=5045737 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Ribosomal RNA-processing protein RRP42
rifcsplowo2_01_scaffold_7949_14
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

9653..9853
DNA (201bp) protein (67aa)
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] Tax=AR18
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360FC43
hypothetical protein
rifcsplowo2_01_scaffold_7949_15
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

9958..10218
DNA (261bp) protein (87aa)
Transcriptional modulator of MazE/toxin, MazF n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RF40_ARCPA
MazF family transcriptional regulator
transcriptional modulator of MazE/toxin, MazF Tax=RBG_16_Archaea_50_20_curated
rifcsplowo2_01_scaffold_7949_16

Not on your lists

10263..11402
DNA (1140bp) protein (380aa)
Enolase {ECO:0000256|RuleBase:RU000654}; EC=4.2.1.11 {ECO:0000256|RuleBase:RU000654};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
eno; phosphopyruvate hydratase Eno (EC:4.2.1.11)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E3B39
rifcsplowo2_01_scaffold_7949_17
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

11443..12507
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NGY9_METST id=5103806 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=AR6
hypothetical protein
rifcsplowo2_01_scaffold_7949_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

12582..14207
DNA (1626bp) protein (542aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360FC10
GroL; HSP60 family chaperonin Tax=CG_Woesearch_02
Thermosome, chaperonin Cpn60/TCP-1
rifcsplowo2_01_scaffold_7949_19
unknown

Not on your lists

14332..14646
DNA (315bp) protein (105aa)

This feature has no annotations

rifcsplowo2_01_scaffold_7949_20
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

14649..15581
DNA (933bp) protein (311aa)
NEQ169 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74NB8_NANEQ
hypothetical protein
Type IV secretory pathway, VirB11 component {ECO:0000313|EMBL:AIG97537.1}; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Arch
rifcsplowo2_01_scaffold_7949_21

Not on your lists

15709..16602
DNA (894bp) protein (298aa)
RNA methylase, NOL1/NOP2/sun family n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2T5_FERPA id=5103608 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNA methylase {ECO:0000313|EMBL:KHO51890.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
RNA methylase, NOL1/NOP2/sun family
rifcsplowo2_01_scaffold_7949_22
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


16634..17857
DNA (1224bp) protein (408aa)
tRNA CCA-pyrophosphorylase; K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] Tax=AR17
tRNA nucleotidyltransferase (CCA-adding enzyme) n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WSV3_9EURY id=5103551 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
tRNA nucleotidyltransferase CCA-adding enzyme
rifcsplowo2_01_scaffold_7949_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

17947..18600
DNA (654bp) protein (218aa)
proteasome endopeptidase complex subunit beta (EC:3.4.25.1); K03433 proteasome beta subunit [EC:3.4.25.1] Tax=CG_Woesearch_02
Proteasome subunit beta n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=PSB_FERPA id=5103651 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Proteasome subunit beta
rifcsplowo2_01_scaffold_7949_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

18633..19910
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036EAF14
KH-domain/beta-lactamase-domain-containing protein; K07041 Tax=CG_Woesearch_02
KH-domain/beta-lactamase-domain-containing protein
rifcsplowo2_01_scaffold_7949_25
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

20059..20442
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036EAF14
putative mRNA 3'-end processing factor 2; K07041 Tax=AR9
mRNA 3'-end processing factor
rifcsplowo2_01_scaffold_7949_26
unknown

Not on your lists

comp(20444..21355)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E7644
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28677_ARCFU Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_7949_27
unknown

Not on your lists

21406..21882
DNA (477bp) protein (159aa)

This feature has no annotations

Displaying 27 items

View Taxonomy