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rifcsplowo2_01_scaffold_19118

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_19118_1
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..281)
DNA (279bp) protein (93aa)
Methanoculleus bourgensis MS2 complete genome n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LMH9_METBM
Mobile element protein
Mobile element protein {ECO:0000313|EMBL:AKB76270.1}; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina la
rifcsplowo2_01_scaffold_19118_2
unknown

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comp(470..634)
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037944A6
Uncharacterized protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I717_METCZ Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_19118_3

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821..2056
DNA (1236bp) protein (412aa)
PHP domain protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0A1_DICTD id=5103143 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
PHP protein
PHP protein {ECO:0000313|EMBL:AJF62424.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_19118_4

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comp(2053..2826)
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Methanobacterium RepID=K2QFB8_METFO id=5103144 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62425.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_19118_5
unknown

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comp(3004..3789)
DNA (786bp) protein (262aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFN2_ACIB4 id=5103146 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Translation initiation factor 2 subunit alpha n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFN2_ACIB4 Tax=AR20
Translation initiation factor 2 subunit alpha
rifcsplowo2_01_scaffold_19118_6
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(3794..3988)
DNA (195bp) protein (65aa)
30S ribosomal protein S27e n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEZ2_9EURY id=5103147 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S27e
rps27e; 30S ribosomal protein S27e; K02978 small subunit ribosomal protein S27e Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_19118_7
unknown

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comp(3985..4296)
DNA (312bp) protein (104aa)
LSU ribosomal protein L44E n=1 Tax=nanoarchaeote Nst1 RepID=R1G2S0_9ARCH id=5103148 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
LSU ribosomal protein L44E n=1 Tax=nanoarchaeote Nst1 RepID=R1G2S0_9ARCH Tax=AR20
LSU ribosomal protein L44E
rifcsplowo2_01_scaffold_19118_8
unknown

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comp(4293..4907)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUK4_9ARCH id=5103149 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUK4_9ARCH Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_19118_9
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(4926..6077)
DNA (1152bp) protein (384aa)
phosphonopyruvate decarboxylase-like protein (EC:5.4.2.1)
Phosphoglycerate mutase AP superfamily {ECO:0000313|EMBL:GAN32306.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Broca
Phosphonopyruvate decarboxylase-related protein id=2235421 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
rifcsplowo2_01_scaffold_19118_10
unknown

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comp(6117..6758)
DNA (642bp) protein (214aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19118_11
AR18, Woesearchaeaota, DPANN, Archaea

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6810..7790
DNA (981bp) protein (327aa)
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5050697 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] Tax=AR18
tRNA pseudouridine synthase, TruD family (EC:5.4.99.27)
rifcsplowo2_01_scaffold_19118_12
unknown

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7836..8246
DNA (411bp) protein (137aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19118_13
AR18, Woesearchaeaota, DPANN, Archaea

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8286..9476
DNA (1191bp) protein (397aa)
ftsY; signal recognition particle receptor FtsY; K03110 fused signal recognition particle receptor id=5050700 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ftsY; signal recognition particle receptor FtsY; K03110 fused signal recognition particle receptor Tax=AR18
Signal recognition particle GTPase
Displaying 13 items

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