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rifcsplowo2_01_scaffold_18030

Search features with annotation key words

Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_18030_1
unknown

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1..546
DNA (546bp) protein (182aa)
Amino acid permease n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BUD9_METCG id=5103485 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Amino acid permease n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BUD9_METCG Tax=AR20
Amino acid permease
rifcsplowo2_01_scaffold_18030_2

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549..1109
DNA (561bp) protein (187aa)
Amino acid permease n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BUD9_METCG id=5103485 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Amino acid permease
Amino acid permease {ECO:0000313|EMBL:AJF62766.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_18030_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(1102..1794)
DNA (693bp) protein (231aa)
transcriptional regulator TrmB Tax=RBG_13_Pacearchaeota_36_9_curated
TrmB family transcriptional regulator id=5044157 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_18030_4
unknown

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1906..2394
DNA (489bp) protein (163aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18030_5

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2474..3001
DNA (528bp) protein (176aa)
Uncharacterized protein id=5800782 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF62112.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsplowo2_01_scaffold_18030_6
CG_Woesearch_02, Woesearchaeota, Archaea

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3005..3271
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003770C1A
adenylate kinase Tax=CG_Woesearch_02
Adenylate kinase
rifcsplowo2_01_scaffold_18030_7
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3289..3471)
DNA (183bp) protein (61aa)
30S ribosomal protein S27ae; K02977 small subunit ribosomal protein S27Ae id=5049718 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S27ae; K02977 small subunit ribosomal protein S27Ae Tax=AR18
30S ribosomal protein S27ae
rifcsplowo2_01_scaffold_18030_8
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(3446..3739)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376F1AE
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
Ribosomal protein S24E
rifcsplowo2_01_scaffold_18030_9
unknown

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comp(3785..5182)
DNA (1398bp) protein (466aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18030_10
AR19, Pacearchaeaota, DPANN, Archaea

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5217..6101
DNA (885bp) protein (295aa)
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF Tax=AR19
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5045761 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Protein-export membrane protein SecF
rifcsplowo2_01_scaffold_18030_11
AR17, Woesearchaeaota, DPANN, Archaea

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6085..7827
DNA (1743bp) protein (581aa)
SecD/SecF/SecDF export membrane protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEL5_9EURY id=5102895 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
NEQ436 Tax=AR17
SecD/SecF/SecDF export membrane protein
rifcsplowo2_01_scaffold_18030_12
unknown

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comp(7835..8125)
DNA (291bp) protein (97aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18030_13
unknown

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comp(8130..8261)
DNA (132bp) protein (44aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18030_14

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8444..9385
DNA (942bp) protein (314aa)
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL id=5103746 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SpoVT/AbrB protein
SpoVT/AbrB protein {ECO:0000313|EMBL:AJF63024.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_18030_15
unknown

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9400..10821
DNA (1422bp) protein (474aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18030_16
CG_Woesearch_02, Woesearchaeota, Archaea

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10853..11644
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003798972
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
rifcsplowo2_01_scaffold_18030_17
unknown

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comp(11823..12374)
DNA (552bp) protein (184aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18030_18
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(12376..12846)
DNA (471bp) protein (157aa)
id=5044628 Tax=CG_Woesearch_02
id=5044628 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_18030_19

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12994..13566
DNA (573bp) protein (191aa)
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein n=1 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0ACG9_CALLD id=5103442 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AJF62723.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_18030_20
AR18, Woesearchaeaota, DPANN, Archaea

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comp(13591..14082)
DNA (492bp) protein (164aa)
nucleoside-diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] id=5045753 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
nucleoside-diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=AR18
nucleoside diphosphate kinase
rifcsplowo2_01_scaffold_18030_21
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(14259..14579)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003790FD9
rps28e; 30S ribosomal protein S28; K02979 small subunit ribosomal protein S28e Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
30S ribosomal protein S28e
rifcsplowo2_01_scaffold_18030_22

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comp(14583..14921)
DNA (339bp) protein (113aa)
50S ribosomal protein L7Ae n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=RL7A_AERPE id=5103741 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L7Ae
50S ribosomal protein L7Ae {ECO:0000313|EMBL:AJF63019.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_18030_23

Not on your lists

15079..15240
DNA (162bp) protein (54aa)
id=5048386 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45058.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsplowo2_01_scaffold_18030_24

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15395..15724
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035F928F
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
nascent polypeptide associated complex nac
rifcsplowo2_01_scaffold_18030_25

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15768..16256
DNA (489bp) protein (163aa)
hypothetical protein
id=5103667 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62948.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_18030_26
AR20, Woesearchaeaota, DPANN, Archaea

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16240..16701
DNA (462bp) protein (154aa)
hypothetical protein
id=5103666 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_18030_27

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16705..18483
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Sulfolobus virus STSV2 RepID=K9ME32_9VIRU
Marine sediment metagenome DNA, contig: S01H1_S33701 {ECO:0000313|EMBL:GAG36895.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsplowo2_01_scaffold_18030_28
AR18, Woesearchaeaota, DPANN, Archaea

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18480..19262
DNA (783bp) protein (261aa)
cell division ATPase MinD; K03609 septum site-determining protein MinD id=5044126 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cell division ATPase MinD; K03609 septum site-determining protein MinD Tax=AR18
cell division ATPase MinD
rifcsplowo2_01_scaffold_18030_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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19305..20315
DNA (1011bp) protein (337aa)
protease Do (EC:3.4.21.108); K01362 [EC:3.4.21.-] id=24610939 bin=RAAC11 species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RAAC11 organism_group=Unknown_CP
protease Do (EC:3.4.21.108); K01362 [EC:3.4.21.-] Tax=GWF2_RBX1_38_17_curated
protease do (EC:3.4.21.108)
rifcsplowo2_01_scaffold_18030_30

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comp(20393..20818)
DNA (426bp) protein (142aa)
id=5049518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO51893.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Displaying items 1-30 of 37 in total

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