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rifcsplowo2_01_scaffold_5788

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_5788_1
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

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1..672
DNA (672bp) protein (224aa)
GAF domain/GGDEF domain protein id=4853137 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
GAF domain/GGDEF domain-containing protein Tax=GWC2_Nitrospirae_42_7_curated
response regulator receiver modulated diguanylate cyclase
rifcsplowo2_01_scaffold_5788_2
unknown

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714..1148
DNA (435bp) protein (145aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5788_3
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1195..1896
DNA (702bp) protein (234aa)
hypothetical protein Tax=GWC2_Deltaproteobacteria_42_11_curated
Putative uncharacterized protein id=2480725 bin=GWC2_Deltaproteobacteria_56_8 species=Methanoculleus marisnigri genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
hypothetical protein
rifcsplowo2_01_scaffold_5788_4

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comp(1918..2496)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A6A62
Conserved hypothetical membrane protein, peptidase family M50 {ECO:0000313|EMBL:KHO52812.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Conserved hypothetical membrane protein, peptidase family M50
rifcsplowo2_01_scaffold_5788_5
CG_Micra_06, Micraarchaeota, Archaea

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comp(2522..2929)
DNA (408bp) protein (136aa)
Nucleotide-binding protein, PIN domain protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0YDL6_9ZZZZ
hypothetical protein Tax=CG_Micra_06
Nucleotide-binding protein, PIN domain-containing protein
rifcsplowo2_01_scaffold_5788_6
CG_Micra_06, Micraarchaeota, Archaea

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comp(2926..3147)
DNA (222bp) protein (74aa)
hypothetical protein Tax=CG_Micra_06
hypothetical protein id=5048108 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_5788_7

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3172..3891
DNA (720bp) protein (240aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Ribonuclease n=2 Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWV0_9EURY id=5103472 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribonuclease
rifcsplowo2_01_scaffold_5788_8

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4111..7542
DNA (3432bp) protein (1144aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003780A4C
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
chromosome segregation protein SMC
rifcsplowo2_01_scaffold_5788_9
AR18, Woesearchaeaota, DPANN, Archaea

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comp(7633..8940)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037ED6A1
hypothetical protein
Tax=AR18
rifcsplowo2_01_scaffold_5788_10

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comp(9055..10842)
DNA (1788bp) protein (596aa)
DSBA-like protein thioredoxin protein
DSBA-like thioredoxin domain-containing protein id=5240746 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DSBA-like protein thioredoxin protein {ECO:0000313|EMBL:AJF59738.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsplowo2_01_scaffold_5788_11
unknown

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11240..11698
DNA (459bp) protein (153aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5788_12

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11903..12535
DNA (633bp) protein (211aa)
hypothetical protein
id=5103829 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF63107.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_5788_13

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12684..13289
DNA (606bp) protein (202aa)
30S ribosomal protein S2 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS2_NANEQ id=5102942 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|SAAS:SAAS00084186}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_5788_14
unknown

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13338..13595
DNA (258bp) protein (86aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5788_15
unknown

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comp(13711..14319)
DNA (609bp) protein (203aa)
50S ribosomal protein L11 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369B37C
LSU ribosomal protein L11P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXB4_METFV Tax=AR20
LSU ribosomal protein L11P
rifcsplowo2_01_scaffold_5788_16

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comp(14493..14969)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003807E84
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
LSU ribosomal protein L24A Rpl24A
rifcsplowo2_01_scaffold_5788_17

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comp(14971..15159)
DNA (189bp) protein (63aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF00793.1}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins id=5043663 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Preprotein translocase subunit Sss1
rifcsplowo2_01_scaffold_5788_18
AR6, Pacearchaeaota, DPANN, Archaea

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15234..15716
DNA (483bp) protein (161aa)
Tax=AR6
rifcsplowo2_01_scaffold_5788_19
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(15717..16628)
DNA (912bp) protein (304aa)
Putative phosphoesterase, Icc family n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QH58_9EURY
Putative phosphoesterase, Icc family {ECO:0000313|EMBL:EGQ43629.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).
rifcsplowo2_01_scaffold_5788_20
unknown

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comp(16754..17842)
DNA (1089bp) protein (363aa)
Cell division protein FtsZ n=1 Tax=sediment metagenome RepID=D9PEV5_9ZZZZ id=5103027 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Cell division protein FtsZ n=1 Tax=sediment metagenome RepID=D9PEV5_9ZZZZ Tax=AR20
Cell division protein FtsZ
rifcsplowo2_01_scaffold_5788_21
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(17921..18544)
DNA (624bp) protein (208aa)
peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] Tax=CG_Woesearch_02
peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] id=5043665 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Peptidyl-prolyl cis-trans isomerase
Displaying 21 items

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