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rifcsplowo2_01_scaffold_2682

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsplowo2_01_scaffold_2682_1
unknown

Not on your lists

comp(1..114)
-----------------
DNA (114bp)
protein (38aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2682_2
RIFOXYC2_FULL_RIF_OD1_09_47_9_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

300..1622
-----------------
DNA (1323bp)
protein (441aa)
radical SAM domain-containing protein id=130540 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
rifcsplowo2_01_scaffold_2682_3
unknown

Not on your lists

1633..1860
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2682_4

Not on your lists

1823..2587
-----------------
DNA (765bp)
protein (255aa)
rifcsplowo2_01_scaffold_2682_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(2584..3600)
-----------------
DNA (1017bp)
protein (339aa)
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=3474 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
AsnC/Lrp family transcriptional regulator
rifcsplowo2_01_scaffold_2682_6
unknown

Not on your lists

3751..3882
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2682_7
unknown

Not on your lists

3879..4064
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2682_8
unknown

Not on your lists

4067..4336
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2682_9
unknown

Not on your lists

4427..4567
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2682_10
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(4530..5762)
-----------------
DNA (1233bp)
protein (411aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037D30C4
integrase
rifcsplowo2_01_scaffold_2682_11
unknown

Not on your lists

comp(6465..7748)
-----------------
DNA (1284bp)
protein (428aa)
Elongation factor 1-alpha n=7 Tax=Methanocaldococcaceae RepID=EF1A_METJA id=5103708 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Elongation factor 1-alpha
rifcsplowo2_01_scaffold_2682_12

Not on your lists

7867..8550
-----------------
DNA (684bp)
protein (228aa)
oxidoreductase FAD/NAD(P)-binding domain-containing protein id=5045308 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
oxidoreductase FAD/NAD(P)-binding domain-containing protein
rifcsplowo2_01_scaffold_2682_13
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

8585..9775
-----------------
DNA (1191bp)
protein (397aa)
galactosyltransferase or LPS biosynthesis rfbu related protein id=5049561 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
galactosyltransferase or LPS biosynthesis rfbu related protein
rifcsplowo2_01_scaffold_2682_14
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

9835..11292
-----------------
DNA (1458bp)
protein (486aa)
radical SAM domain-containing protein id=5049560 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
B12 binding/radical SAM domain-containing protein
rifcsplowo2_01_scaffold_2682_15
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

11636..12838
-----------------
DNA (1203bp)
protein (401aa)
radical SAM protein id=5049557 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
radical SAM protein
rifcsplowo2_01_scaffold_2682_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(12835..13965)
-----------------
DNA (1131bp)
protein (377aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E1529
RNA-directed DNA polymerase Reverse transcriptase
rifcsplowo2_01_scaffold_2682_17
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(13913..14533)
-----------------
DNA (621bp)
protein (207aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E1529
RNA-directed DNA polymerase Reverse transcriptase
rifcsplowo2_01_scaffold_2682_18
unknown

Not on your lists

comp(14873..15739)
-----------------
DNA (867bp)
protein (289aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2682_19
unknown

Not on your lists

16056..16220
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2682_20
Candidatus Parvarchaeum acidiphilum, Candidatus Parvarchaeum, Parvarchaeota, Archaea

Not on your lists

16383..17633
-----------------
DNA (1251bp)
protein (417aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000379674F
putative ATPase (AAA+ superfamily)
rifcsplowo2_01_scaffold_2682_21
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(17682..18566)
-----------------
DNA (885bp)
protein (295aa)
family 2 glycosyl transferase id=5049555 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Glycosyltransferases involved in cell wall biogenesis
rifcsplowo2_01_scaffold_2682_22
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18563..20242)
-----------------
DNA (1680bp)
protein (560aa)
hypothetical protein id=5049554 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_2682_23
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(20273..22924)
-----------------
DNA (2652bp)
protein (884aa)
oligosaccharyl transferase (EC:2.4.1.119); K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] id=5049553 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_2682_24
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(22928..23779)
-----------------
DNA (852bp)
protein (284aa)
hypothetical protein
id=5049552 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_2682_25
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

23852..24208
-----------------
DNA (357bp)
protein (119aa)
id=5044958 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_2682_26
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

24279..24608
-----------------
DNA (330bp)
protein (110aa)
id=5049549 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_2682_27
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(24777..26981)
-----------------
DNA (2205bp)
protein (735aa)
ATP-binding protein (EC:6.3.5.4) id=5049546 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein
rifcsplowo2_01_scaffold_2682_28
unknown

Not on your lists

27040..27195
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

Displaying 28 items

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