ggKbase home page

rifcsplowo2_01_scaffold_2235_11

Organism: RIFCSPLOWO2_01_FULL_Woesearchaeota_35_30

partial RP 33 / 55 MC: 6 BSCG 7 / 51 ASCG 25 / 38 MC: 3
Location: 10746..12128

Top 3 Functional Annotations

Value Algorithm Source
Cobalamin B12-binding:Radical SAM {ECO:0000313|EMBL:KKR04502.1}; TaxID=1618922 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 429.0
  • Bit_score: 408
  • Evalue 1.70e-110
Cobalamin B12-binding:Radical SAM id=1898960 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 428.0
  • Bit_score: 381
  • Evalue 1.60e-102
radical SAM protein similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 407.0
  • Bit_score: 308
  • Evalue 2.80e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_OD1_39_14 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1383
ATGTCAAAAATAAAAGTAGCCATTGTTAACCCCAGTTTAACTAGAGAAGAGAAACTAGGAAAATCTGCGAAATATACTTCTGCCGAATTGCCTCCTTTGGGCTTGTGTTATTTGGCTGCGGCTTTAAGAGAAAAAGGTTATGAAGTGAAAATAATTGATGCTCCAGGACAATTTTTGCCAATTGAAGAGACAATTAAACAAGTATTAGAATTCAAAGCAGAATATGTTTGCTTAGCCGCCACCATAATATCAATATTTCCTGCCGCAGATTTTACCAATGAATTGGCTCGTAAATCCAATATAAAAGTGATTTTGGGAGGACCACATGTAACTGCAGTTCCAGAGGAGACCATGGAAAAATTTCCAGAATTTGATATAGCAATTATTGGGGAAGCGGAAATAACCCTACCGGAAGTATTAAAAGTCCTAGAAAACAAAGGAGATTTAAAAGAAGTAGATGGATTAATATTTAAACTGGATGGAAAATTGATAAAAAACCGTCCAAGAAAATTAATTCAAAACTTAGATACTTTACCTTTACCAGCATATGATTTAATACCAAATCTAGCTGAAAACTACCGCCCATCTAAATTAACGTATCATAGATTACCATCTACTTCTATAATCACTTCAAGAGGATGTCCACACCAATGTACCTTTTGTGACCGCTCTGTTTTCGGAAACCAGTGGAGATTTCATAGTGCTGAATATATTATGAAAGTTATTAACTGGCTTCATAAGGATTATGGAATTGTTGATTTCTTTTTTGTTGATGATCATTTCACCGTAAATAAAGAGAGAGCAATGAAAATTTGTAATGCTATAATTGATTCTAATTTAGATATTACTTGGTCAGTTATTGGAAGAGTTGATTACGTTGATGTTGAAATGTTAAAAATGATGAAAAAAGCCGGTTGCAAACAAGTTTCTTTTGGCCTTGAATCAGGATCACAACAAATTTTAGACTTTCTTAAGAAGGGAGTAACCCTAGACAAAATGAGATATGGTGTAAGAATAACTAAAGAAATAGGGATGGAAGTAAAAGGTTTGTTTATGGTTGGAACACCCACAGAAACTAAAGAAACATTAGATGAAACCATGAATTTTATTAAAGAATTAAAATTAGACTTTGTTAATGTAGGAGCTTTTACACCAATTCCCGGTGCAGAGATATATGAAGATGCTAAAAAATATGGGGACTTTGAAGCTGATTGGAGAAAGATGAATTTGTGGGACGTCGTTTTTGTGCCACATGGTTTAACCAAAGAATATATTGAACAGTTTGTAAAAAGATGTAGTGGAGAAGAAATTAAAACAAGTAAAGAGTTAATGTTAGAACGGGAAGAAATGTTAATGCTAGAACAAGGAGAGATTAACGTTTAG
PROTEIN sequence
Length: 461
MSKIKVAIVNPSLTREEKLGKSAKYTSAELPPLGLCYLAAALREKGYEVKIIDAPGQFLPIEETIKQVLEFKAEYVCLAATIISIFPAADFTNELARKSNIKVILGGPHVTAVPEETMEKFPEFDIAIIGEAEITLPEVLKVLENKGDLKEVDGLIFKLDGKLIKNRPRKLIQNLDTLPLPAYDLIPNLAENYRPSKLTYHRLPSTSIITSRGCPHQCTFCDRSVFGNQWRFHSAEYIMKVINWLHKDYGIVDFFFVDDHFTVNKERAMKICNAIIDSNLDITWSVIGRVDYVDVEMLKMMKKAGCKQVSFGLESGSQQILDFLKKGVTLDKMRYGVRITKEIGMEVKGLFMVGTPTETKETLDETMNFIKELKLDFVNVGAFTPIPGAEIYEDAKKYGDFEADWRKMNLWDVVFVPHGLTKEYIEQFVKRCSGEEIKTSKELMLEREEMLMLEQGEINV*