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rifcsplowo2_01_scaffold_2235

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_2235_1
GWC2_OD1_52_8, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(446..2005)
-----------------
DNA (1560bp)
protein (520aa)
putative o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
Putative o-succinylbenzoate--CoA ligase n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RAK2_9DELT
Aminotransferase {ECO:0000313|EMBL:KKW31443.1}; TaxID=1618676 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Kaiserbacteria) bacterium GW2011_GWC2_52_8b.;"
rifcsplowo2_01_scaffold_2235_2
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2153..3874)
-----------------
DNA (1722bp)
protein (574aa)
radical SAM protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2F0A8
radical SAM protein Tax=GWD2_Bacteroidetes_33_33_curated
radical SAM protein
rifcsplowo2_01_scaffold_2235_3
unknown

Not on your lists

comp(3996..4358)
-----------------
DNA (363bp)
protein (121aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2235_4
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(4324..4989)
-----------------
DNA (666bp)
protein (222aa)
Cyclase family protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1S1_NITMS
cyclase family protein
Cyclase family protein {ECO:0000313|EMBL:ABX12042.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SCM
rifcsplowo2_01_scaffold_2235_5
unknown

Not on your lists

comp(5018..5821)
-----------------
DNA (804bp)
protein (268aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2235_6
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(5898..6953)
-----------------
DNA (1056bp)
protein (352aa)
Pyruvate carboxyltransferase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1R9_NITMS
pyruvate carboxyltransferase
Pyruvate carboxyltransferase {ECO:0000313|EMBL:ABX12040.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (stra
rifcsplowo2_01_scaffold_2235_7
RIFOXYD1_FULL_OD1_48_21_curated, Parcubacteria, Bacteria

Not on your lists

comp(6977..7321)
-----------------
DNA (345bp)
protein (115aa)
acpS; holo-(acyl-carrier-protein) synthase (EC:2.7.8.7); K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RIFOXYD1_FULL_OD1_48_21_curated
acpS; Holo-[acyl-carrier-protein] synthase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=1 Tax=Clostridium sp. CAG:306 RepID=R6PBV2_9CLOT
rifcsplowo2_01_scaffold_2235_8
R_OD1_Magasanikbacteria_33_17, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

7600..9003
-----------------
DNA (1404bp)
protein (468aa)
Capsule polysaccharide biosynthesis protein n=1 Tax=Clostridium autoethanogenum DSM 10061 RepID=U5RVS6_9CLOT
capsule polysaccharide biosynthesis domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_33_17_curated
Capsule polysaccharide biosynthesis protein
rifcsplowo2_01_scaffold_2235_9

Not on your lists

9073..9912
-----------------
DNA (840bp)
protein (280aa)
Similar to 3-demethylubiquinone-9 3-methyltransferase id=3579048 bin=GWC2_Planctomycete_KSU_39_26 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Uncharacterized protein {ECO:0000313|EMBL:CEG13784.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
type 11 methyltransferase
rifcsplowo2_01_scaffold_2235_10
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9931..10674
-----------------
DNA (744bp)
protein (248aa)
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43)
CMP-N-acetylneuraminic acid synthetase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TVZ1_9CLOT
CMP-N-acetylneuraminic acid synthetase {ECO:0000313|EMBL:EKQ51122.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Mad
rifcsplowo2_01_scaffold_2235_11
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

10746..12128
-----------------
DNA (1383bp)
protein (461aa)
Cobalamin B12-binding:Radical SAM {ECO:0000313|EMBL:KKR04502.1}; TaxID=1618922 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_14.;"
Cobalamin B12-binding:Radical SAM id=1898960 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
radical SAM protein
rifcsplowo2_01_scaffold_2235_12
unknown

Not on your lists

comp(12258..13253)
-----------------
DNA (996bp)
protein (332aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2235_13
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

comp(13234..14340)
-----------------
DNA (1107bp)
protein (369aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase n=1 Tax=Cyanobacterium aponinum (strain PCC 10605) RepID=K9Z409_CYAAP
DegT/DnrJ/EryC1/StrS aminotransferase Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
rifcsplowo2_01_scaffold_2235_14
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14327..15835)
-----------------
DNA (1509bp)
protein (503aa)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:AKB37918.1}; EC=4.2.1.46 {ECO:0000313|EMBL:AKB37918.1};; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcin
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PXP9_METMA
rifcsplowo2_01_scaffold_2235_15
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15875..16930)
-----------------
DNA (1056bp)
protein (352aa)
N-acetylneuraminate synthase (EC:2.5.1.57)
NeuB family protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R838_9THEO
NeuB family protein {ECO:0000313|EMBL:EEB75926.1}; Uncharacterized protein {ECO:0000313|EMBL:KKC30438.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaeroba
rifcsplowo2_01_scaffold_2235_16
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

17019..17807
-----------------
DNA (789bp)
protein (263aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036D115E
type 11 methyltransferase Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
type 11 methyltransferase
rifcsplowo2_01_scaffold_2235_17
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(17823..19556)
-----------------
DNA (1734bp)
protein (578aa)
Putative membrane protein n=1 Tax=Fibrobacter succinogenes (strain ATCC 19169 / S85) RepID=C9RRR6_FIBSS
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
rifcsplowo2_01_scaffold_2235_18
GWC2_CPR2_39_35, CPR2, Bacteria

Not on your lists

comp(19564..20544)
-----------------
DNA (981bp)
protein (327aa)
oxidoreductase domain protein id=1758654 bin=GWD2_CPR2_39_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
oxidoreductase domain protein Tax=GWC2_CPR2_39_35
dehydrogenase
rifcsplowo2_01_scaffold_2235_19
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(20537..21712)
-----------------
DNA (1176bp)
protein (392aa)
Predicted pyridoxal phosphate-dependent enzyme n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D5C0_PELTS
putative aminotransferase Tax=AR9
WecE; pyridoxal phosphate-dependent enzyme
rifcsplowo2_01_scaffold_2235_20
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(21802..22605)
-----------------
DNA (804bp)
protein (268aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
rifcsplowo2_01_scaffold_2235_21
BJP_IG2158_Actinobacteria_57_21, Bacteria

Not on your lists

comp(22627..23175)
-----------------
DNA (549bp)
protein (183aa)
Putative sugar acetyltransferase id=1758656 bin=GWD2_CPR2_39_7 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
putative sugar acetyltransferase
Tax=BJP_IG2158_Actinobacteria_57_21
rifcsplowo2_01_scaffold_2235_22

Not on your lists

comp(23172..24281)
-----------------
DNA (1110bp)
protein (370aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KHO49547.1}; EC=5.1.3.14 {ECO:0000313|EMBL:KHO49547.1};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D8A0_METSW
rifcsplowo2_01_scaffold_2235_23

Not on your lists

comp(24359..25102)
-----------------
DNA (744bp)
protein (248aa)
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:KHO49546.1}; EC=2.4.1.83 {ECO:0000313|EMBL:KHO49546.1};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI0002F6D9F0
glycosyl transferase family 2
rifcsplowo2_01_scaffold_2235_24
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(25174..25500)
-----------------
DNA (327bp)
protein (109aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGI5_9EURY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EET90332.1}; TaxID=425595 species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
rifcsplowo2_01_scaffold_2235_25
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(25497..25856)
-----------------
DNA (360bp)
protein (120aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5047440 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_2235_26
RHI_OP11_45_10, Microgenomates, Bacteria

Not on your lists

comp(25860..26963)
-----------------
DNA (1104bp)
protein (368aa)
degt/dnrj/eryc1/strs aminotransferase Tax=RIFCSPHIGHO2_12_FULL_OP11_45_10_curated
degt/dnrj/eryc1/strs aminotransferase id=5090520 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
spore coat protein
rifcsplowo2_01_scaffold_2235_27
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27009..28091)
-----------------
DNA (1083bp)
protein (361aa)
FemAB-related protein, PEP-CTERM system-associated n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2X2_GEODF
FemAB-like protein
FemAB superfamily protein {ECO:0000313|EMBL:ACM21318.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltoni
rifcsplowo2_01_scaffold_2235_28
GWA1_WWE3_41_8, WWE3, Bacteria

Not on your lists

comp(28121..29188)
-----------------
DNA (1068bp)
protein (356aa)
Putative uncharacterized protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z4E0_9EURY
Pili biogenesis protein ATPase {ECO:0000313|EMBL:KKS21769.1}; Flags: Fragment;; TaxID=1619103 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWA1_41_8.;
hypothetical protein
rifcsplowo2_01_scaffold_2235_29
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(29179..30075)
-----------------
DNA (897bp)
protein (299aa)
polysaccharide deacetylase
polysaccharide deacetylase id=5241170 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
polysaccharide deacetylase Tax=AR10
rifcsplowo2_01_scaffold_2235_30
R_OP11_Gottesmanbacteria_39_11, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(30204..31943)
-----------------
DNA (1740bp)
protein (580aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035D7510
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Gottesmanbacteria_39_11_curated
hypothetical protein
Displaying items 1-30 of 36 in total

View Taxonomy