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rifcsplowo2_01_scaffold_22852

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_22852_1
CG_Woesearch_02, Woesearchaeota, Archaea

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16..1314
DNA (1299bp) protein (433aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQJ1_METIM id=5103750 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
translation initiation factor IF-2; K03242 translation initiation factor 2 subunit 3 Tax=CG_Woesearch_02
Translation initiation factor 2 subunit gamma
rifcsplowo2_01_scaffold_22852_2
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1318..2568)
DNA (1251bp) protein (417aa)
collagenase; K08303 putative protease [EC:3.4.-.-] id=5048279 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
collagenase; K08303 putative protease [EC:3.4.-.-] Tax=AR18
peptidase U32
rifcsplowo2_01_scaffold_22852_3
unknown

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comp(2571..4997)
DNA (2427bp) protein (809aa)
DNA gyrase subunit A n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3A8P8_CARHZ id=5103756 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA gyrase subunit A n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3A8P8_CARHZ Tax=AR20
DNA gyrase subunit A
rifcsplowo2_01_scaffold_22852_4

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comp(5048..6967)
DNA (1920bp) protein (640aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1579378 species="Archaea.;"
DNA gyrase subunit B n=1 Tax=Thermincola potens (strain JR) RepID=D5X8C5_THEPJ id=5103759 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA gyrase subunit B
rifcsplowo2_01_scaffold_22852_5
unknown

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7452..7997
DNA (546bp) protein (182aa)
Heat shock protein Hsp20 n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DG46_HYDTT id=5103482 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Heat shock protein Hsp20 n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DG46_HYDTT Tax=AR20
Heat shock protein Hsp20
rifcsplowo2_01_scaffold_22852_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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8030..8527
DNA (498bp) protein (166aa)
Protein GrpE n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GIW3_METPE
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=RBG_13_Pacearchaeota_36_9_curated
GrpE protein HSP-70 cofactor
rifcsplowo2_01_scaffold_22852_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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8520..10340
DNA (1821bp) protein (607aa)
Chaperone protein DnaK n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I8R2_METB6
molecular chaperone DnaK; K04043 molecular chaperone DnaK Tax=RBG_13_Pacearchaeota_36_9_curated
molecular chaperone DnaK
rifcsplowo2_01_scaffold_22852_8
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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10341..11399
DNA (1059bp) protein (353aa)
Chaperone protein DnaJ n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GIW5_METPE
DnaJ; molecular chaperone DnaJ; K03686 molecular chaperone DnaJ Tax=CG_Aenigma_01
chaperone protein DnaJ
rifcsplowo2_01_scaffold_22852_9
AR20, Woesearchaeaota, DPANN, Archaea

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11459..11743
DNA (285bp) protein (95aa)
hypothetical protein
id=5103695 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_22852_10

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comp(11886..12215)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035F928F
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
nac; NagC family transcriptional regulator
rifcsplowo2_01_scaffold_22852_11
unknown

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comp(12212..12382)
DNA (171bp) protein (57aa)

This feature has no annotations

rifcsplowo2_01_scaffold_22852_12
AR20, Woesearchaeaota, DPANN, Archaea

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12472..12939
DNA (468bp) protein (156aa)
hypothetical protein
id=5103667 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_22852_13
AR17, Woesearchaeaota, DPANN, Archaea

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12923..13369
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037D734E
hypothetical protein
Tax=AR17
rifcsplowo2_01_scaffold_22852_14

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comp(13366..14103)
DNA (738bp) protein (246aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVZ3_9EURY id=5103660 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Chromosome segregation and condensation protein ScpA
Chromosome segregation and condensation protein ScpA {ECO:0000313|EMBL:AJF62941.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_22852_15
unknown

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comp(14408..14536)
DNA (129bp) protein (43aa)

This feature has no annotations

rifcsplowo2_01_scaffold_22852_16

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comp(14642..15319)
DNA (678bp) protein (226aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1457885 species="Archaea; Eu
Histidine--tRNA ligase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVR1_9BACT id=5103662 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Histidine-tRNA ligase
rifcsplowo2_01_scaffold_22852_17

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comp(15397..15810)
DNA (414bp) protein (138aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1457885 species="Archaea; Eu
hisS; histidine--tRNA ligase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Bacillus cereus VD107 RepID=J8GDM6_BACCE
rifcsplowo2_01_scaffold_22852_18
unknown

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comp(15854..15976)
DNA (123bp) protein (41aa)

This feature has no annotations

rifcsplowo2_01_scaffold_22852_19
unknown

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16273..17679
DNA (1407bp) protein (469aa)

This feature has no annotations

rifcsplowo2_01_scaffold_22852_20
unknown

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17799..18092
DNA (294bp) protein (98aa)

This feature has no annotations

rifcsplowo2_01_scaffold_22852_21
unknown

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18156..18710
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037C1B84
rifcsplowo2_01_scaffold_22852_22
AR15, Woesearchaeaota, DPANN, Archaea

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18712..19290
DNA (579bp) protein (193aa)
transmembrane_regions id=5800295 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
transmembrane_regions Tax=AR15
rifcsplowo2_01_scaffold_22852_23
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

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19327..20718
DNA (1392bp) protein (464aa)
anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase elongator protein (EC:1.14.13.81) Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A7599
Fe-S oxidoreductase
rifcsplowo2_01_scaffold_22852_24
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(20894..21793)
DNA (900bp) protein (300aa)
filamentation induced by cAMP protein fic Tax=CG_Pacearch_05
Putative uncharacterized protein id=4935122 bin=PER_GWC2_41_7 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
rifcsplowo2_01_scaffold_22852_25

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comp(21874..22287)
DNA (414bp) protein (138aa)
hypothetical protein id=5044906 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46002.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
PilT protein domain-containing protein
rifcsplowo2_01_scaffold_22852_26

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comp(22284..22544)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035CA56B
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:KHO53471.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
transcriptional regulator, AbrB family
rifcsplowo2_01_scaffold_22852_27
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(22951..24102)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J0V9W8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EJF10982.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
acetyl xylan esterase
rifcsplowo2_01_scaffold_22852_28
AR17, Woesearchaeaota, DPANN, Archaea

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comp(24216..24785)
DNA (570bp) protein (190aa)
hypothetical protein
id=5103344 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR17
Displaying 28 items

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