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rifcsplowo2_01_scaffold_5260

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_5260_1
unknown

Not on your lists

3..878
-----------------
DNA (876bp)
protein (292aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5260_2
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

904..1173
-----------------
DNA (270bp)
protein (90aa)
RNA polymerase dimerization; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] id=5044978 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
RNA polymerase dimerization; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] Tax=AR18
DNA-directed RNA polymerase subunit L
rifcsplowo2_01_scaffold_5260_3
Thermococcus gammatolerans, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

1192..1917
-----------------
DNA (726bp)
protein (242aa)
Serine/threonine protein kinase, putative S-layer protein {ECO:0000313|EMBL:ACS33301.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ACS33301.1};; TaxID=593117 species="Archaea; Euryarchaeota; Thermococci; Thermoco
WD40-domain containing protein n=1 Tax=Thermococcus zilligii RepID=UPI00029A5CED
hypothetical protein
rifcsplowo2_01_scaffold_5260_4
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

2036..3808
-----------------
DNA (1773bp)
protein (591aa)
id=5044979 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_5260_5
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3797..4063)
-----------------
DNA (267bp)
protein (89aa)
id=5044980 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_5260_6

Not on your lists

4165..4764
-----------------
DNA (600bp)
protein (200aa)
id=5044985 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54585.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
rifcsplowo2_01_scaffold_5260_7
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

4818..5108
-----------------
DNA (291bp)
protein (97aa)
transcription termination factor Tfs; K03057 transcription elongation factor id=5044987 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
transcription termination factor Tfs; K03057 transcription elongation factor Tax=AR18
transcription elongation factor TFIIS
rifcsplowo2_01_scaffold_5260_8
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

5164..5559
-----------------
DNA (396bp)
protein (132aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
rifcsplowo2_01_scaffold_5260_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5983..6429)
-----------------
DNA (447bp)
protein (149aa)
Transposase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PHM2_9EURY
Transposase {ECO:0000313|EMBL:KCZ71397.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Cand
transposase
rifcsplowo2_01_scaffold_5260_10
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6549..6707)
-----------------
DNA (159bp)
protein (53aa)
hypothetical protein
id=5103533 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_5260_11
Thermococcus nautili, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

6836..7195
-----------------
DNA (360bp)
protein (120aa)
Uncharacterized protein n=1 Tax=Thermococcus sp. CL1 RepID=I3ZW31_9EURY
putative solute binding protein
Putative solute binding protein {ECO:0000313|EMBL:AHL22349.1}; TaxID=195522 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus nautili.
rifcsplowo2_01_scaffold_5260_12
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

7257..7733
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein
id=5044989 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_5260_13
unknown

Not on your lists

7954..8307
-----------------
DNA (354bp)
protein (118aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5260_14
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

8498..9244
-----------------
DNA (747bp)
protein (249aa)
hypothetical protein; K04802 proliferating cell nuclear antigen id=5044991 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein; K04802 proliferating cell nuclear antigen Tax=AR18
DNA polymerase sliding clamp
rifcsplowo2_01_scaffold_5260_15
unknown

Not on your lists

9317..9910
-----------------
DNA (594bp)
protein (198aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5260_16
unknown

Not on your lists

9941..10405
-----------------
DNA (465bp)
protein (155aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5260_17
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

10470..11270
-----------------
DNA (801bp)
protein (267aa)
id=5049520 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR17
rifcsplowo2_01_scaffold_5260_18

Not on your lists

11236..15078
-----------------
DNA (3843bp)
protein (1281aa)
hypothetical protein
id=5103337 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62618.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_5260_19
Pyrococcus horikoshii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

15128..15898
-----------------
DNA (771bp)
protein (257aa)
Putative uncharacterized protein PH0370 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58108_PYRHO
hypothetical protein
Putative uncharacterized protein PH0370 {ECO:0000313|EMBL:BAA29444.1}; TaxID=70601 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus horik
rifcsplowo2_01_scaffold_5260_20
Pyrococcus horikoshii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

15901..16617
-----------------
DNA (717bp)
protein (239aa)
Putative uncharacterized protein PH0371 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58109_PYRHO
hypothetical protein
Putative uncharacterized protein PH0371 {ECO:0000313|EMBL:BAA29445.1}; TaxID=70601 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus horik
rifcsplowo2_01_scaffold_5260_21
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

16738..17508
-----------------
DNA (771bp)
protein (257aa)
id=5049520 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_5260_22
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

17505..20381
-----------------
DNA (2877bp)
protein (959aa)
id=5049521 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
Displaying 22 items

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