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rifcsplowo2_01_scaffold_777_6

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_28_39

near complete RP 36 / 55 MC: 4 BSCG 8 / 51 ASCG 33 / 38
Location: comp(7505..8284)

Top 3 Functional Annotations

Value Algorithm Source
rrp42p; exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-); K12589 exosome complex component RRP42 id=5045737 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 260.0
  • Bit_score: 325
  • Evalue 5.80e-86
Exosome complex RNA-binding protein Rrp42, exosome complex component RRP42 {ECO:0000313|EMBL:KHO54404.1}; EC=3.1.13.- {ECO:0000313|EMBL:KHO54404.1};; TaxID=1579376 species="Archaea.;" source="archaeon similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 259.0
  • Bit_score: 325
  • Evalue 8.20e-86
Ribosomal RNA-processing protein RRP42 similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 253.0
  • Bit_score: 267
  • Evalue 4.10e-69

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Taxonomy

archaeon GW2011_AR18 → Archaea

Sequences

DNA sequence
Length: 780
ATGGTTGACGTTGTAAAAGAACACATGCTTTCAATTTTAAAAAAAGGCAAAAGATCAGATGCAAGGGGATTTGAAGATTTTAGGGAGATTAAGATAGAATATAATATAAGTAAAAGTGCAGAAGGCAGTGCTAAAGTTTCTATAGGTGATACAGAAGTTATTGCTGGAGTAAAATTAGAATTAACAGAACCATTCCCTGATACTCCTGATGAAGGCGGGATTATGATTAATGTAGAATTAAGGCCTATGTCAAGTCCTGATTTTGAACTTGGTCCTCCAAGTCATGAAGCAATTGAACTTTCAAGAGTTGTTGATAGAGCTATAAGAGAAGGCCATGCTTTGGATTTTAAAAAATTATGTTTGAAAAAAGGAGAATCCTGCTGGATGGTAATAATTGATATTTATCCTGTTAATGATGCGGGAAATCTTTTTGATGCAGCGGGATTAGCAGCTATGGCTGCTTTGCAGGAGACTAAGTTTCCTAAAATAGAAGAAAATAATGTTGTTAATTATAAAGAAAGCAGCGGTAAAAAATTACCATTAAAAGCTATGCCTCTTTGCTGTACTGTTGTTAAAATCGGGGATTATTTTATAGTTGATCCTGATAATGAGGAAGAAAAAGAAGTTGATGCTAAATTAGTTGTGGGTATTTTAGAAGATGGAAATTTGTGTTCTATGCAAAAAACCGGAGAGATGGGTTTAGATGCTAATGAACTTGAAAAGATGGTTGATCTTGCTATTAAAAAAACTAAGGAACTTAGGAAGGTGCTGTCAAAATGA
PROTEIN sequence
Length: 260
MVDVVKEHMLSILKKGKRSDARGFEDFREIKIEYNISKSAEGSAKVSIGDTEVIAGVKLELTEPFPDTPDEGGIMINVELRPMSSPDFELGPPSHEAIELSRVVDRAIREGHALDFKKLCLKKGESCWMVIIDIYPVNDAGNLFDAAGLAAMAALQETKFPKIEENNVVNYKESSGKKLPLKAMPLCCTVVKIGDYFIVDPDNEEEKEVDAKLVVGILEDGNLCSMQKTGEMGLDANELEKMVDLAIKKTKELRKVLSK*