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rifcsplowo2_01_scaffold_777

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_777_1
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(1..2025)
-----------------
DNA (2025bp)
protein (675aa)
PKD domain containing protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsplowo2_01_scaffold_777_2
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2163..5558)
-----------------
DNA (3396bp)
protein (1132aa)
UPI0003D1B100 related cluster n=1 Tax=unknown RepID=UPI0003D1B100
Uncharacterized protein {ECO:0000313|EMBL:ETA67863.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tinda
hypothetical protein
rifcsplowo2_01_scaffold_777_3

Not on your lists

comp(5571..6245)
-----------------
DNA (675bp)
protein (225aa)
TM helix repeat-containing protein id=5045740 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
TM helix repeat-containing protein {ECO:0000313|EMBL:KHO54407.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Conserved TM helix repeat-containing protein
rifcsplowo2_01_scaffold_777_4
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6319..7302)
-----------------
DNA (984bp)
protein (328aa)
phosphopyruvate hydratase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] id=5045739 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
phosphopyruvate hydratase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=AR18
enolase (EC:4.2.1.11)
rifcsplowo2_01_scaffold_777_5

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comp(7305..7508)
-----------------
DNA (204bp)
protein (68aa)
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] id=5045738 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
rifcsplowo2_01_scaffold_777_6

Not on your lists

comp(7505..8284)
-----------------
DNA (780bp)
protein (260aa)
rrp42p; exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-); K12589 exosome complex component RRP42 id=5045737 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Exosome complex RNA-binding protein Rrp42, exosome complex component RRP42 {ECO:0000313|EMBL:KHO54404.1}; EC=3.1.13.- {ECO:0000313|EMBL:KHO54404.1};; TaxID=1579376 species="Archaea.;" source="archaeon
Ribosomal RNA-processing protein RRP42
rifcsplowo2_01_scaffold_777_7
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8289..8993)
-----------------
DNA (705bp)
protein (235aa)
ribosomal RNA-processing protein RRP41/SKI6 (EC:3.1.13.-); K11600 exosome complex component RRP41 id=5045736 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ribosomal RNA-processing protein RRP41/SKI6 (EC:3.1.13.-); K11600 exosome complex component RRP41 Tax=AR18
exosome complex exonuclease Rrp41
rifcsplowo2_01_scaffold_777_8
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8986..9678)
-----------------
DNA (693bp)
protein (231aa)
exosome complex RNA-binding protein Rrp4; K03679 exosome complex component RRP4 id=5045735 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
exosome complex RNA-binding protein Rrp4; K03679 exosome complex component RRP4 Tax=AR18
putative exosome complex RNA-binding protein 1
rifcsplowo2_01_scaffold_777_9
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(9681..10382)
-----------------
DNA (702bp)
protein (234aa)
hypothetical protein; K14574 ribosome maturation protein SDO1 id=5045734 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein; K14574 ribosome maturation protein SDO1 Tax=AR18
Ribosome maturation protein SDO1-like protein
rifcsplowo2_01_scaffold_777_10

Not on your lists

comp(10385..11110)
-----------------
DNA (726bp)
protein (242aa)
proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=5045733 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Proteasome subunit alpha {ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|RuleBase:RU000552};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Proteasome subunit alpha
rifcsplowo2_01_scaffold_777_11
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11113..11466)
-----------------
DNA (354bp)
protein (118aa)
ribonuclease P protein component 2 (EC:3.1.26.5); K03537 ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] id=5045732 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ribonuclease P protein component 2 (EC:3.1.26.5); K03537 ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] Tax=AR18
Ribonuclease P protein component 2
rifcsplowo2_01_scaffold_777_12
unknown

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comp(11542..11700)
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

rifcsplowo2_01_scaffold_777_13
unknown

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comp(11761..12114)
-----------------
DNA (354bp)
protein (118aa)

This feature has no annotations

rifcsplowo2_01_scaffold_777_14
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12155..12652)
-----------------
DNA (498bp)
protein (166aa)
Ribonuclease P protein component 3
id=5045730 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_777_15

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12704..13408
-----------------
DNA (705bp)
protein (235aa)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synt
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific n=1 Tax=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) RepID=A6UPZ0_METVS id=5103830 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tritrans,polycis-undecaprenyl-diphosphate synthase, geranylgeranyl-diphosphate specific
rifcsplowo2_01_scaffold_777_16
unknown

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comp(13456..13812)
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

rifcsplowo2_01_scaffold_777_17
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13863..14351)
-----------------
DNA (489bp)
protein (163aa)
adenylate kinase (EC:2.7.4.3) id=5045728 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
adenylate kinase (EC:2.7.4.3) Tax=AR18
Adenylate kinase
rifcsplowo2_01_scaffold_777_18
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14348..15034)
-----------------
DNA (687bp)
protein (229aa)
uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=AR18
uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] id=5045727 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
pyrH; uridylate kinase PyrH
rifcsplowo2_01_scaffold_777_19
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15096..15392)
-----------------
DNA (297bp)
protein (99aa)
hypothetical protein; K09728 hypothetical protein id=5045726 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein; K09728 hypothetical protein Tax=AR18
hypothetical protein
rifcsplowo2_01_scaffold_777_20
unknown

Not on your lists

comp(15423..16007)
-----------------
DNA (585bp)
protein (195aa)

This feature has no annotations

rifcsplowo2_01_scaffold_777_21
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(16007..17932)
-----------------
DNA (1926bp)
protein (642aa)
Marine sediment metagenome DNA, contig: S01H1_S23427 Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_777_22
GWA1_OP11_48_10_plus, Microgenomates, Bacteria

Not on your lists

18133..19845
-----------------
DNA (1713bp)
protein (571aa)
Threonine--tRNA ligase n=6 Tax=Clostridium thermocellum RepID=SYT_CLOTH id=5102976 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Threonine-tRNA ligase {ECO:0000313|EMBL:KKU91914.1}; TaxID=1618496 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA1_48_10.;"
Threonine-tRNA ligase
rifcsplowo2_01_scaffold_777_23
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

19848..20333
-----------------
DNA (486bp)
protein (162aa)
id=5048310 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_777_24
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20394..21956
-----------------
DNA (1563bp)
protein (521aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZZ30_9PLAN rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ78241.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula m
hypothetical protein
rifcsplowo2_01_scaffold_777_25
GWA2_OD1_42_32, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(21958..23322)
-----------------
DNA (1365bp)
protein (455aa)
Radical SAM domain protein {ECO:0000313|EMBL:KKS57371.1}; TaxID=1619039 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_42_32.;"
Radical SAM domain protein id=3021747 bin=GWC2_Elusimicrobia_51_8 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
radical SAM domain-containing protein
rifcsplowo2_01_scaffold_777_26
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23370..24452)
-----------------
DNA (1083bp)
protein (361aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q2W8_METMZ
Uncharacterized protein {ECO:0000313|EMBL:AKB61552.1}; TaxID=1434115 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina m
hypothetical protein
rifcsplowo2_01_scaffold_777_27
Campylobacter showae, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24454..26544)
-----------------
DNA (2091bp)
protein (697aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-N07 RepID=UPI000370D526
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:EMG31240.1}; TaxID=1073353 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;"
oxidoreductase
rifcsplowo2_01_scaffold_777_28

Not on your lists

26655..27905
-----------------
DNA (1251bp)
protein (417aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22); K02472 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.-] id=5908 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Uncharacterized protein {ECO:0000313|EMBL:EKE14883.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rifcsplowo2_01_scaffold_777_29
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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27907..28242
-----------------
DNA (336bp)
protein (112aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF
4'-phosphopantetheinyl transferase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1R7_NITMS
4'-phosphopantetheinyl transferase
rifcsplowo2_01_scaffold_777_30
unknown

Not on your lists

comp(28290..28595)
-----------------
DNA (306bp)
protein (102aa)

This feature has no annotations

Displaying items 1-30 of 92 in total

View Taxonomy